Camelina sativa (false flax): 104769751
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Entry
104769751 CDS
T05044
Name
(RefSeq) probable pectate lyase 19 isoform X2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104769751
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104769751
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104769751
NCBI-ProteinID:
XP_010492335
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Position
20:6824586..6827431
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AA seq
499 aa
AA seq
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MEMARLLKLMFMFCIAGLIPTIRGNISELDEYWSRRADEAREFTLQAYHSDPYEIVDHFH
ERHYDNSTDDATETEDGVAQLEEEHGGAKPEEEHGGVQLEEEHGGAKPEEEEEEGIKMVG
NSTNSTRRSLRGKGKGKWSKLKGPCTASNPIDKCWRCRTNWAKRRKKLTRCVRGFGHRTT
GGKRGRIYVVTSNLDEDMVNPKPGTLRHAVIQKEPLWIIFKNDMSIRLNQELLINSHKTI
DARGANVHIAHGAGITMQFVKNVIIHGLHIHHISESSGGMIRDSVDHFGMRTRADGDGLS
IYGSSNIWLDHISMSKCQDGLIDAIVGSTGITISNSHFTHHNDVMLLGAQNTNEADKHMQ
VTVAYNHFGKGLVQRMPRIRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHK
PHYREVTKRDYAPEDEWKHWTWRSEKDVFMNGAYFRQSGNPHFKSAHTRKQMIKPKNGMA
VSKLTKYAGALDCRVGKRC
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctaggttgttaaagttgatgtttatgttttgtattgccggtctgattccg
accatacgaggcaacatttctgagttggacgagtattggtcgcgacgagccgacgaagcc
cgagaattcactctacaagcttatcattctgatccttacgaaatcgtcgaccactttcat
gagcgtcattacgacaactccactgacgatgctacggagaccgaagatggcgttgctcag
cttgaagaggaacatggcggtgcgaagcctgaagaggaacatggcggtgtgcagcttgaa
gaggaacatggcggtgcgaagcctgaagaggaggaagaagagggtattaaaatggtcgga
aactcgacaaacagcacgagacgaagcctaagaggtaaaggcaaaggaaaatggagtaag
cttaagggaccttgtaccgcaagtaacccgatagataaatgttggcgttgccgtacgaat
tgggccaagcgtcgtaagaagcttacacgttgcgtccgagggttcggtcacaggacgacc
ggaggaaaacgcggacgcatctatgtggtcacaagcaacctcgacgaggacatggtgaac
ccaaaacccggtacattgcgtcacgccgttatccagaaggaacctctctggatcattttc
aagaacgacatgagcattcgtttaaaccaagagcttctgattaatagccacaagacaatc
gatgcacgaggagctaatgtccatatcgcgcatggcgcagggatcacgatgcagtttgtg
aaaaatgtaatcatccatggattgcacattcaccacatttccgaaagtagcggtggtatg
atccgagactcggtagaccatttcggaatgaggactagagccgatggagacggtttatcg
atttacggttcgtctaacatttggcttgaccatatttcgatgtcaaaatgtcaagatgga
ctcattgatgccatcgttggatccactggcattacaatctccaactctcacttcactcac
cacaacgatgtgatgttgcttggtgcgcaaaacacgaacgaagcggacaagcatatgcaa
gtcacagtggcctataaccattttggtaaaggacttgtacagaggatgcctaggatccga
tggggatttgttcatgttgtgaacaacgactacactcattgggagctttacgcaattgga
ggtagtcaaggtccaacaattctcagccatggaaaccgattcatagctcctccacacaaa
cctcattacagagaggtgacaaagagggattatgctccggaggacgagtggaaacactgg
acctggagatccgagaaagatgtattcatgaacggagcttatttcagacaatctggtaac
cctcacttcaaaagcgcacacactaggaaacaaatgatcaaacccaaaaatggaatggct
gtttctaagctgaccaagtacgctggagcacttgattgcagagtcggaaaacgctgttag
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