KEGG   Camelina sativa (false flax): 104769809
Entry
104769809         CDS       T05044                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csat04812]
    104769809
Cytoskeleton proteins [BR:csat04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     104769809
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT140_1st eIF2A Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_VPS8 VPS8_N PROPPIN Ge1_WD40 DUF6563 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 104769809
NCBI-ProteinID: XP_010492433
LinkDB
Position
3:4943265..4949918
AA seq 1011 aa
MANRGYNLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSLMSLCGHTSA
VDSVAFNSKEVLVLAGASSGVIKLWDLQEAKMVRAFTGHRANCSAVEFHPFGEFLASGSS
DTNLRVWDTRKKGCIQTYKGHNRGITTIKFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF
KFHEGPICSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRAITFHPDGQT
LFCGLDDALKVYSWEPVICRDGADMGWSTLGDLCINGGKFIGCSYYRNSIGIWVSDISQL
EPYEAGSEDKKGSMVKRFSLLDDQSSERMGSGPRCSSSPDYETREIKNIYVDSTGGNLNV
AQNTGSLKVTLPLESGKVATMASEKQDATYFGQTGDKYSSMRSVVSRDSDCGEESSCPER
ESITFSRTKSGMLLGPAHVRKALAKFENSKESVVVQSRTRKNSGLDVQEEPHTQSVFLSE
QSGSKPFDAEESTIKGITDKFEKVLSSESPTDETNRMLLKPPRVQRSSNSEYHESRRAIS
VDSGTSDNNKSGLEHSRDRDLPTDTEHPGGSRELNPMKIVGGVKVVSGRTRSLVEKFERG
EKSTHTEAASTTIAQNTNAVQEDPHTTSRQTGQTAVISTRRARSTPARVMPIVLNRDSNM
TSNEPPLTQPARTSSVPVIFSQATSVTYDEPSVTLTQQSRTSPSRRLPVTINQATNNASN
EASVTSRRPRRTSSARVKHTSLSQAMDMTSNEFPVTSSRPSRISPARVMPTKLNQSDYVT
SDTSHIASRHRVSPTQMLATPTVIDQVADMALDETHVAQIQPACENLPQKEEPQISESEK
DSEITDTLMQTHDEFLSTLQSRLAKLQIVRHFWDRNDVKGAIGALRKLTDQSVQADVISI
LTDKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVSAPRIV
GVDLHADERLQICQLCSAGLHKIQRILPVLARRGGLITRKAQELNLVLQEP
NT seq 3036 nt   +upstreamnt  +downstreamnt
atggcgaatcgtggttataacttgcaggagtttgtggcacattctggaaatgtgaattgc
ctaagtatcggaaagaagacatcacgtctccttctaaccggtggagatgattataaggtc
aacctttggtctatcggcaagaccacttcgctaatgagtctttgtgggcatacaagcgca
gttgactcagtagctttcaactcgaaagaagttttggtgctagctggagcttcttcaggt
gtgataaagctgtgggatctacaagaagcaaagatggttcgagcttttactggacataga
gccaactgttctgctgttgagtttcatccatttggtgaatttcttgcatccggatccagt
gacacaaatctaagagtttgggataccagaaagaaggggtgcatccaaacatacaagggt
cataatcgtggcattaccactatcaagtttagtcctgatggtcgttgggtagtttctgga
ggacttgacaatgttgtaaaggtatgggatttgactgctggaaagctcttgcatgagttt
aagtttcatgaaggacctatctgttccctagacttccatccgcttgagtttctcctagcc
acaggttctgctgacaggactgtgaaattctgggatttggaaacgtttgaactgattgga
tctactagaccagaggctactggagttcgtgcaatcacttttcatccagatgggcaaact
cttttctgtggattggatgatgccttaaaggtttattcatgggaaccagtgatttgccgg
gatggtgctgatatgggatggtcaacacttggtgacttatgcatcaatggaggaaagttc
attggttgttcatattaccgaaattctattgggatttgggtctcagatatatcgcaactt
gagccatatgaagctggatctgaggataagaaaggaagcatggtgaaaagattcagtctc
ttggatgatcagtcgtcagagagaatgggaagtggtccaaggtgcagttcatccccagat
tatgagacaagagagataaagaacatatatgttgactccacaggtggaaatttgaatgtt
gcgcaaaatacaggatctctgaaagtgacattgcctttggaatcaggaaaagtagctact
atggcgagtgagaagcaggatgcaacatattttggacaaacaggagataagtattctagt
atgcgtagtgttgtatctcgggatagtgattgtggagaggaatcttcttgtccagaaagg
gaatctatcactttctcaagaactaaatcgggtatgttgctaggaccagctcatgtaaga
aaggcgctagcaaagtttgaaaattcaaaggagtccgtggttgttcaatccagaactcga
aagaacagcggattggatgttcaagaggagccacacactcaaagtgtgttcctttcagaa
cagagtggtagtaaaccatttgatgcggaagagtctaccatcaagggtattacagacaag
tttgaaaaagttttatcatcggaatcaccaactgatgaaacgaatcgtatgcttcttaaa
ccacctcgtgtacaaaggtcatcgaatagcgagtatcatgagtcaagacgagcaatatct
gttgattctgggacttctgataacaacaaaagtgggttggagcactctagagaccgtgac
ttgcctacagacactgaacaccctggaggcagcagagaattaaatcccatgaagattgtt
ggaggagtcaaagttgtctcagggaggacacgctcgttggttgagaagtttgagagagga
gaaaaaagtactcataccgaagcagccagtaccaccatagctcaaaacactaatgcggtg
caggaagatccgcatacaacatcaagacagacaggacaaactgctgtaatatcaacacga
cgagctaggagtactccagccagagtaatgcctattgttctcaatcgggatagtaacatg
acatctaatgagcctcctttaacacaaccagctaggacatcttccgttccagtgatattc
agtcaagctactagtgtcacatatgatgagccttctgtaacattaacacaacaatctaga
acttctccatcccggagattgcctgtgacaatcaatcaggcgacaaataacgcatctaat
gaggcttctgtaacatcaaggcgaccacgcaggacttcttcagcacgagtaaagcatacg
tcactcagtcaggcaatggacatgacatctaatgagtttcctgtaacatcatcacgtcca
tctaggatttctccagcccgtgtaatgcccacaaaactaaatcagtctgattatgtgaca
tctgatacatcccatatagcatccaggcaccgagttagtccaactcaaatgctggctaca
ccaactgtgattgatcaggtggccgatatggcgctggatgagacacatgtagcacaaata
caaccagcttgcgagaacttaccgcagaaggaagagcctcaaatatctgaaagtgaaaaa
gatagtgaaatcactgatactctaatgcaaactcatgatgagttcttaagcactcttcaa
tcgaggttggcgaagttacaaattgtaagacatttttgggatcgtaacgatgttaaaggt
gccatcggtgcattgagaaagctgacagatcagtctgttcaagcagatgtgatcagtatt
ctaaccgacaaaatagaaattctcacattggatatgttttctcaattggttcctgtcctc
acaagcttattgggtagcaggacagagaggccggtaaatgtctccttggatatgctcttg
aaacttgtagcagtgttcggtacagttatacgctcaactgtctcagctccacgaattgtc
ggcgttgatcttcatgcagatgaaaggctacaaatctgccaattatgttctgcgggattg
cacaagattcaaaggattcttccagttctcgcaagaagaggcggtctaataactagaaag
gctcaagaactaaacctagttcttcaagagccatag

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