KEGG   Camelina sativa (false flax): 104769946
Entry
104769946         CDS       T05044                                 
Name
(RefSeq) DNA repair protein RAD4-like
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
csat  Camelina sativa (false flax)
Pathway
csat03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    104769946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csat03400]
    104769946
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      104769946
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 104769946
NCBI-ProteinID: XP_010492575
LinkDB
Position
20:7855761..7860414
AA seq 865 aa
MKSTSDSKDGRLSAASRAAVNKILDRRTSRGKKKQDDNFDSSKRDKSVNDKGKQAVKATL
TDNVLDDRECVTIVLSDDDDMNDSDWEDCPIPSLDNTVDANVDDTVDTYIDDTRELTIEF
DDDVPEAKKQKSAYRATAKDKERAELVHKVHLLCLLARGRIVDNACNDPLIQAALLSLLP
SYLSKVANIEKVTVRDVAPLLRWVRENFSVRCTPSSEKTFRTSLAFALESRKGTAEELAA
LSVALFRALKLTTRFVSILDVASLKPGADKDESSGQNRGKMKHGVFRTSTLMVPKQQAIS
SYPNKSSSHVEDKSVCETSEPQHRNSLRYDQLQHNTVNSSCEAGTSSKSGGTKRKGDVEY
EMQIAMALSATADNQQRSKVNEKTKIRKITKIIDGPSVSDQVISTAIGSKKVDSPLCWAE
VYCNGENMDGRWVHVDAVNGMIDAAQNVEATTTACKTSLRYVVAFSGGGAKDVTRRYCTK
WHTISSKRVCSVWWDMVLAPLIHLESAATHNEDIANRVSLSSSSYGIRSALEDMELATRS
LTEPLPTNQQAYKSHELYAIEKWLHKNQILHPKGPVLGFCNGHPVYPRTCVRTLKTKERW
LHDGLQLKANEVPSKILKRNSKFKKVKISGDGDCDIRGGSYCMELYGKWQMEPLCLPHAV
NGIVPKNERGQVDVWSEKCLPPGTVHLKLPRIFSVAKRFGIDYAPAMVGFEYRSGGATPI
FQGIVVCTEFKDTILEAYAEEQEKREEEERRRNEAQAASRWYQLLSSILTRERLKNRYAN
NSTSVETKSLEVNSVPIIKAKNVKSPEKQRVTKTGGGGRSRVRKTRNEDESHEHVFLEDQ
ETFDEETSVKTKRCKCGFSVEVEQM
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgaagtctactagtgatagtaaggacggtagactctcagcagcctctagagctgcagtt
aacaaaattcttgacagaagaacttctcgaggcaagaagaagcaagatgacaactttgat
tcctcaaagcgggataaaagtgtaaatgacaaggggaagcaagccgttaaggcaacttta
actgataacgttctagatgacagggaatgtgttacaattgtactctcggatgatgatgat
atgaatgattcagactgggaagactgtccaattcctagtcttgataacacggttgatgct
aatgttgatgacacggttgatacttatattgatgacactagagagttaaccatagaattt
gatgatgatgttcctgaagctaagaagcagaagagtgcataccgtgcaacagcaaaagac
aaggaacgggcggaacttgtacataaggttcacttgctctgtttgctcgcaagagggagg
atagttgacaatgcttgtaatgatcccttgattcaggctgccttgctttcacttctgcca
tcatacttatcaaaagtagcgaatatcgagaaagttactgtcagggatgtagcccctctt
cttcgttgggttcgtgaaaacttttccgttaggtgtactcccagttctgagaaaactttt
cgtacttccctagcatttgctcttgaatctcgtaaaggcacagctgaagagcttgcagca
ctgtctgttgctttgtttagagcattaaagctcacaactcggtttgtgtctattcttgat
gttgcatccttaaaaccaggggccgataaggacgaatcatcaggtcaaaaccgaggtaaa
atgaagcatggggtattcaggacctcaacgcttatggtaccaaaacagcaggccatctcg
tcatacccaaataaatcttcttcccatgttgaggataaaagtgtctgtgaaacgtctgag
cctcagcataggaactccctgcgatatgatcagttgcaacacaatacagtcaattcatct
tgcgaagcaggaacgtctagtaaatctggtggaacaaagaggaaaggagatgtagaatac
gagatgcaaatagccatggctttgagtgcaactgcagacaaccaacaacgctctaaagtg
aacgagaaaacgaaaattcgtaaaataacaaaaataattgatggcccgtcagtttctgac
caagtaatatccacggctatcggttctaagaaagtagattctcccctttgttgggctgag
gtgtattgcaatggggaaaacatggatgggagatgggtccatgtggatgctgttaatgga
atgatagatgcagcgcaaaacgttgaagctacaactaccgcttgcaaaacctctcttaga
tatgttgtcgctttttctggtggtggagccaaagatgtcactcgcaggtactgtacaaaa
tggcacactatttcatccaaaagggtgtgttcagtgtggtgggatatggtattagcaccg
ttaatacatctagagtcagccgcaactcacaatgaagacattgctaacagagtttcattg
agtagctcttcctatggtataaggagtgctcttgaagatatggagttggctacgcggtcg
ttgactgagccgcttcctactaaccagcaggcctataaaagccacgaactctatgctatt
gagaaatggcttcacaagaaccagatacttcacccaaaaggtccagttctgggattttgc
aatggtcatccagtatatcctcgaacctgtgtgcggactcttaaaacaaaagaaagatgg
cttcatgatgggctacaacttaaggcgaatgaagttccctcaaagattctgaagcgtaac
tcgaagttcaagaaagtaaaaatttctggagatggcgactgtgacatcagaggtggttct
tattgcatggaactatatgggaagtggcaaatggaaccattgtgtctccctcacgctgtt
aatggaattgtgcccaagaacgaacgcggtcaagttgatgtctggtctgagaaatgcctt
ccacctggaacagtccacctaaagcttcctcgaatattttcggttgctaagagatttggt
atagattatgcacctgccatggttggtttcgagtacagaagtggaggtgctactcctatt
tttcaaggtattgtggtctgtaccgagttcaaagacacaatcctcgaggcatatgcagaa
gaacaagaaaagagagaagaggaggagagaagaagaaatgaagcacaagcagcttcaaga
tggtatcagcttctttcgtcgatcttaacccgtgaaagattgaaaaaccgttacgcaaat
aactccaccagtgtcgaaacgaagagtttggaagtgaattcagtgcctatcattaaggcc
aagaatgtgaaatcacctgaaaagcagagagtgactaagactggaggaggaggaaggtca
cgagtaagaaagactcgtaatgaagacgaaagccatgagcatgtgtttcttgaggaccaa
gaaacctttgatgaggaaacctctgtgaaaacaaaacgctgcaaatgtggcttttctgtc
gaagttgaacaaatgtag

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