Camelina sativa (false flax): 104769946
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Entry
104769946 CDS
T05044
Name
(RefSeq) DNA repair protein RAD4-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104769946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104769946
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104769946
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
104769946
NCBI-ProteinID:
XP_010492575
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Position
20:7855761..7860414
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AA seq
865 aa
AA seq
DB search
MKSTSDSKDGRLSAASRAAVNKILDRRTSRGKKKQDDNFDSSKRDKSVNDKGKQAVKATL
TDNVLDDRECVTIVLSDDDDMNDSDWEDCPIPSLDNTVDANVDDTVDTYIDDTRELTIEF
DDDVPEAKKQKSAYRATAKDKERAELVHKVHLLCLLARGRIVDNACNDPLIQAALLSLLP
SYLSKVANIEKVTVRDVAPLLRWVRENFSVRCTPSSEKTFRTSLAFALESRKGTAEELAA
LSVALFRALKLTTRFVSILDVASLKPGADKDESSGQNRGKMKHGVFRTSTLMVPKQQAIS
SYPNKSSSHVEDKSVCETSEPQHRNSLRYDQLQHNTVNSSCEAGTSSKSGGTKRKGDVEY
EMQIAMALSATADNQQRSKVNEKTKIRKITKIIDGPSVSDQVISTAIGSKKVDSPLCWAE
VYCNGENMDGRWVHVDAVNGMIDAAQNVEATTTACKTSLRYVVAFSGGGAKDVTRRYCTK
WHTISSKRVCSVWWDMVLAPLIHLESAATHNEDIANRVSLSSSSYGIRSALEDMELATRS
LTEPLPTNQQAYKSHELYAIEKWLHKNQILHPKGPVLGFCNGHPVYPRTCVRTLKTKERW
LHDGLQLKANEVPSKILKRNSKFKKVKISGDGDCDIRGGSYCMELYGKWQMEPLCLPHAV
NGIVPKNERGQVDVWSEKCLPPGTVHLKLPRIFSVAKRFGIDYAPAMVGFEYRSGGATPI
FQGIVVCTEFKDTILEAYAEEQEKREEEERRRNEAQAASRWYQLLSSILTRERLKNRYAN
NSTSVETKSLEVNSVPIIKAKNVKSPEKQRVTKTGGGGRSRVRKTRNEDESHEHVFLEDQ
ETFDEETSVKTKRCKCGFSVEVEQM
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctactagtgatagtaaggacggtagactctcagcagcctctagagctgcagtt
aacaaaattcttgacagaagaacttctcgaggcaagaagaagcaagatgacaactttgat
tcctcaaagcgggataaaagtgtaaatgacaaggggaagcaagccgttaaggcaacttta
actgataacgttctagatgacagggaatgtgttacaattgtactctcggatgatgatgat
atgaatgattcagactgggaagactgtccaattcctagtcttgataacacggttgatgct
aatgttgatgacacggttgatacttatattgatgacactagagagttaaccatagaattt
gatgatgatgttcctgaagctaagaagcagaagagtgcataccgtgcaacagcaaaagac
aaggaacgggcggaacttgtacataaggttcacttgctctgtttgctcgcaagagggagg
atagttgacaatgcttgtaatgatcccttgattcaggctgccttgctttcacttctgcca
tcatacttatcaaaagtagcgaatatcgagaaagttactgtcagggatgtagcccctctt
cttcgttgggttcgtgaaaacttttccgttaggtgtactcccagttctgagaaaactttt
cgtacttccctagcatttgctcttgaatctcgtaaaggcacagctgaagagcttgcagca
ctgtctgttgctttgtttagagcattaaagctcacaactcggtttgtgtctattcttgat
gttgcatccttaaaaccaggggccgataaggacgaatcatcaggtcaaaaccgaggtaaa
atgaagcatggggtattcaggacctcaacgcttatggtaccaaaacagcaggccatctcg
tcatacccaaataaatcttcttcccatgttgaggataaaagtgtctgtgaaacgtctgag
cctcagcataggaactccctgcgatatgatcagttgcaacacaatacagtcaattcatct
tgcgaagcaggaacgtctagtaaatctggtggaacaaagaggaaaggagatgtagaatac
gagatgcaaatagccatggctttgagtgcaactgcagacaaccaacaacgctctaaagtg
aacgagaaaacgaaaattcgtaaaataacaaaaataattgatggcccgtcagtttctgac
caagtaatatccacggctatcggttctaagaaagtagattctcccctttgttgggctgag
gtgtattgcaatggggaaaacatggatgggagatgggtccatgtggatgctgttaatgga
atgatagatgcagcgcaaaacgttgaagctacaactaccgcttgcaaaacctctcttaga
tatgttgtcgctttttctggtggtggagccaaagatgtcactcgcaggtactgtacaaaa
tggcacactatttcatccaaaagggtgtgttcagtgtggtgggatatggtattagcaccg
ttaatacatctagagtcagccgcaactcacaatgaagacattgctaacagagtttcattg
agtagctcttcctatggtataaggagtgctcttgaagatatggagttggctacgcggtcg
ttgactgagccgcttcctactaaccagcaggcctataaaagccacgaactctatgctatt
gagaaatggcttcacaagaaccagatacttcacccaaaaggtccagttctgggattttgc
aatggtcatccagtatatcctcgaacctgtgtgcggactcttaaaacaaaagaaagatgg
cttcatgatgggctacaacttaaggcgaatgaagttccctcaaagattctgaagcgtaac
tcgaagttcaagaaagtaaaaatttctggagatggcgactgtgacatcagaggtggttct
tattgcatggaactatatgggaagtggcaaatggaaccattgtgtctccctcacgctgtt
aatggaattgtgcccaagaacgaacgcggtcaagttgatgtctggtctgagaaatgcctt
ccacctggaacagtccacctaaagcttcctcgaatattttcggttgctaagagatttggt
atagattatgcacctgccatggttggtttcgagtacagaagtggaggtgctactcctatt
tttcaaggtattgtggtctgtaccgagttcaaagacacaatcctcgaggcatatgcagaa
gaacaagaaaagagagaagaggaggagagaagaagaaatgaagcacaagcagcttcaaga
tggtatcagcttctttcgtcgatcttaacccgtgaaagattgaaaaaccgttacgcaaat
aactccaccagtgtcgaaacgaagagtttggaagtgaattcagtgcctatcattaaggcc
aagaatgtgaaatcacctgaaaagcagagagtgactaagactggaggaggaggaaggtca
cgagtaagaaagactcgtaatgaagacgaaagccatgagcatgtgtttcttgaggaccaa
gaaacctttgatgaggaaacctctgtgaaaacaaaacgctgcaaatgtggcttttctgtc
gaagttgaacaaatgtag
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