Camelina sativa (false flax): 104770165
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Entry
104770165 CDS
T05044
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104770165
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104770165
Factors involved in mRNA localization
Other mRNA localization factors
104770165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
104770165
NCBI-ProteinID:
XP_010492842
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All DBs
Position
20:complement(9190621..9198349)
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AA seq
1282 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKA
LNQLNTLIQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRLINIFKNDPVI
PAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGAL
RAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKISRPCRDAGETPEASGSYSDYEKVVRYNYTAEERKALVELVGYIKSVGSMLQRCDT
LVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEI
PSSQHGSDESRANFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVN
DLKQLETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLI
DYILESQNSGLLESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSES
IFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQR
MNKIFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDISIDPFSLMLNEMQEN
ISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGT
QDLNAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGL
QEAMPKSIGLLSFDGGVTGCMKLIREQLNWGSKSELKSEVLRGIKEIGSVIYTMGLLDIV
LREIDTKRFMQTAPWLGLIPGAEGQIVNAQDGESPLVNLLKSATSAVVSSPGCLNPAAFY
TMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFIDITTSKDFYR
IYGGLQIGYLEEVTAPQSAQHEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEV
ETVSASHTHRHPQIHQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPL
PRVRFENTVSAFETLPQKGTVG
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcctgtagaggaagcaatcgcagctctttccacattctccttagaggatgag
caaccagaagtccaaggaccggctgtgatggtttcagctgaaagagcagctactgatagt
cccattgagtatagtgatgttgcagcgtaccggttgtctctctcagaagacacaaaagct
cttaaccagctgaatacacttattcaagaaggaaaagagatggcgtcaattctatacaca
tatagaagttgtgttaaagcactacctcagcttcccgagtctatgaagcatagtcaagcg
gatttgtatctagaaacatatcaggttttggacttagaaatgagtcgtttacgcgaaatt
cagagatggcaatcttcggcctcagctaaattagctgctgacatgcagcggttttccaga
cctgaacgacgcattaatggccccacagtcacacatctttggtcgatgctaaagttgctt
gacgtcttggttcagcttgatcatcttaaaaatgctaaagctagcattcctaatgatttt
tcttggtataagagaacattcactcaagtcagtgcgcagtggcaagatacagatacaatg
agagaagagttagatgacttacagattttcctgagtacacgatgggctattttactgaac
cttcatgttgagatgttccgtgtaaacaatgtggaagatattctccaagttctcatagtc
ttcatcgtggagtctctggagttggattttgcactactttttcctgagcgttatattctt
cttcgagttttaccggttcttgttgtcttagcaactccatctgagaaagataccgaggct
ttgtacaagagggtaaaactgaacagattaataaacattttcaagaatgatcctgtcatt
cctgcgtttccagatctccatctttctcctgctgcaattttaaaagaattgtcggtatac
tttcaaaagttttcatcacagactcgccttctgactcttccagcacctcatgagctccct
ccacgtgaagcgctagaatatcagagacactatctgatagtcaatcacattggagcgctt
cgcgctgagcacgatgatttcacaatccgatttgcgtcatccatgaatcagttattgctg
ttgaagtcaaacgatggagcatatactgaatggtgcagagaggtcaaaggaaatatgtac
gatatggttgttgaaggcttccaactgttaagtagatggacagcgcgcatttgggagcaa
tgtgcttggaaaatttctcgcccatgtagggatgcaggagagactccggaagcctccgga
tcatattctgattacgagaaggtggtgaggtataattatactgcagaagaaaggaaagcc
ttggtcgaacttgttggctatataaagagtgtaggatcgatgctgcagcgctgtgacaca
ttagttgcagatgctttatgggagacaatacatgccgaagttcaggattttgtacagaac
acattagctacaatgttgcgtaccaccttccgaaagaagaaagatctctcaaggattctt
tctgatatgcggacactctcagctgattggatggcaaataccaggcccgaacatgagatt
ccatcttcacaacatggaagtgatgaaagcagagcgaatttcttttatccgaggccagtt
gccccaacagcagcacaggtgcattgcttacagtttttgatatatgaggttgtctctggt
ggaaatctgaggaggccagggggattctttggaaataatggctctgagattcctgttaat
gacttgaagcaattagaaactttcttttacaagctcagctttttcttgcacatattagat
tactcggcaagtattggcattctgactgatctggggttcttgtggtttagagaattttac
ctggagtcttcacgtgttattcagttcccgatcgagtgttcactaccatggatgctgata
gactacattctggaatcccagaattcaggccttcttgagagtgttctgctgccttttgac
atttataatgactcagctcaacaagctctggttgttctgaggcagagattcctctatgat
gaaattgaagctgaggtggaccatggttttgatatatttgtttcaaggctctcggagtct
atattcacatattacaagagttggtcagcgagtgagcttcttgatccatcgtttctcttt
gcgttggacaatggtgaaaagttctccatccagcctgtgaggtttactgcgttatttaaa
atgacaaaagtaaagatacttggtagaacaattaatttaagaagtttgatcgctcagagg
atgaataaaatctttagagagaacctcgagtttctttttgaccgttttgagtcccaggac
ctatgtgctgtagtggaattggagaagctgatagatatcctaaagcactcgcatgaattg
ctttcacaagatatttccatagatcctttcagcctcatgttgaatgaaatgcaagaaaac
atttctcttgtctcattttcaagtcgacttgctacacagatctggtcggagatgcagagt
gatttcctaccaaacttcattctttgcaataccacacagcgatttgtccgttcatcgaaa
gttcctcctactcagaaaccatcagtgccttctgctaagcctagtttctattgtggcact
caagacttaaatgcagctcatcaaagttttgcacgattgcatagtggattttttgggata
ccacatttattttccatagttaaacttcttggatccagatcattgccttggctaataaga
gctttgctggaccatatatcaaataagataacaacacttgagccaatgatctctggattg
caagaagcaatgcccaagtctattggtttgctttcttttgatggtggtgttacaggttgt
atgaagcttatacgagagcaactaaactggggcagtaagtcagaactcaagtcagaagtt
ctacgaggaataaaggaaattggaagtgttatatatacaatgggacttctcgatatcgta
ttgagagagatagacacaaagcgtttcatgcaaacagctccatggttgggattaatcccg
ggtgctgaaggacagatagttaatgctcaagacggtgaaagccctcttgtcaatctctta
aagtcagcaacttctgcagttgtctcaagtcccggttgtctgaatccagcagcgttctac
actatgtccaaacaggcagaagctgcagatcttttgtataaggcgaacatgaacggtgga
agcgttcttgaatacacacttgcattcaccagtgcgtcactcgacaaatattgtagcaaa
tggagtgctcctccaaagacgggcttcattgatatcacaacttcaaaggatttttaccgt
atatacggtggtctgcagattggatatctggaggaggtaacagctccacagtcagctcaa
catgaagtgcttggtgactcgatagcttggggtggttgcaccattatatacttgctcggc
cagcaacttcactttgagttgtttgatttctcgtaccaagtactcaatgtctctgaggtt
gaaactgtctctgcttcacatactcataggcatcctcagatccatcagggatgggaaggt
ttgttggaagggatgaagaaagctcggaggctgaataatcacgtcttctccatgcttaaa
gctcgttgtcccctagaagacaaaacggcttgtgctatcaaacagagtggcgcgccgctc
ccacgtgtcaggtttgagaatactgtatctgctttcgagactctacctcagaaaggcacc
gttggctga
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