Camelina sativa (false flax): 104770165
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Entry
104770165 CDS
T05044
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104770165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104770165
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104770165
Factors involved in mRNA localization
Other mRNA localization factors
104770165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
104770165
NCBI-ProteinID:
XP_010492842
UniProt:
A0ABM0XYJ0
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All DBs
Position
20:complement(9190621..9198349)
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AA seq
1282 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKA
LNQLNTLIQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRLINIFKNDPVI
PAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGAL
RAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKISRPCRDAGETPEASGSYSDYEKVVRYNYTAEERKALVELVGYIKSVGSMLQRCDT
LVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEI
PSSQHGSDESRANFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVN
DLKQLETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLI
DYILESQNSGLLESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSES
IFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQR
MNKIFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDISIDPFSLMLNEMQEN
ISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGT
QDLNAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGL
QEAMPKSIGLLSFDGGVTGCMKLIREQLNWGSKSELKSEVLRGIKEIGSVIYTMGLLDIV
LREIDTKRFMQTAPWLGLIPGAEGQIVNAQDGESPLVNLLKSATSAVVSSPGCLNPAAFY
TMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFIDITTSKDFYR
IYGGLQIGYLEEVTAPQSAQHEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEV
ETVSASHTHRHPQIHQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPL
PRVRFENTVSAFETLPQKGTVG
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcctgtagaggaagcaatcgcagctctttccacattctccttagaggatgag
caaccagaagtccaaggaccggctgtgatggtttcagctgaaagagcagctactgatagt
cccattgagtatagtgatgttgcagcgtaccggttgtctctctcagaagacacaaaagct
cttaaccagctgaatacacttattcaagaaggaaaagagatggcgtcaattctatacaca
tatagaagttgtgttaaagcactacctcagcttcccgagtctatgaagcatagtcaagcg
gatttgtatctagaaacatatcaggttttggacttagaaatgagtcgtttacgcgaaatt
cagagatggcaatcttcggcctcagctaaattagctgctgacatgcagcggttttccaga
cctgaacgacgcattaatggccccacagtcacacatctttggtcgatgctaaagttgctt
gacgtcttggttcagcttgatcatcttaaaaatgctaaagctagcattcctaatgatttt
tcttggtataagagaacattcactcaagtcagtgcgcagtggcaagatacagatacaatg
agagaagagttagatgacttacagattttcctgagtacacgatgggctattttactgaac
cttcatgttgagatgttccgtgtaaacaatgtggaagatattctccaagttctcatagtc
ttcatcgtggagtctctggagttggattttgcactactttttcctgagcgttatattctt
cttcgagttttaccggttcttgttgtcttagcaactccatctgagaaagataccgaggct
ttgtacaagagggtaaaactgaacagattaataaacattttcaagaatgatcctgtcatt
cctgcgtttccagatctccatctttctcctgctgcaattttaaaagaattgtcggtatac
tttcaaaagttttcatcacagactcgccttctgactcttccagcacctcatgagctccct
ccacgtgaagcgctagaatatcagagacactatctgatagtcaatcacattggagcgctt
cgcgctgagcacgatgatttcacaatccgatttgcgtcatccatgaatcagttattgctg
ttgaagtcaaacgatggagcatatactgaatggtgcagagaggtcaaaggaaatatgtac
gatatggttgttgaaggcttccaactgttaagtagatggacagcgcgcatttgggagcaa
tgtgcttggaaaatttctcgcccatgtagggatgcaggagagactccggaagcctccgga
tcatattctgattacgagaaggtggtgaggtataattatactgcagaagaaaggaaagcc
ttggtcgaacttgttggctatataaagagtgtaggatcgatgctgcagcgctgtgacaca
ttagttgcagatgctttatgggagacaatacatgccgaagttcaggattttgtacagaac
acattagctacaatgttgcgtaccaccttccgaaagaagaaagatctctcaaggattctt
tctgatatgcggacactctcagctgattggatggcaaataccaggcccgaacatgagatt
ccatcttcacaacatggaagtgatgaaagcagagcgaatttcttttatccgaggccagtt
gccccaacagcagcacaggtgcattgcttacagtttttgatatatgaggttgtctctggt
ggaaatctgaggaggccagggggattctttggaaataatggctctgagattcctgttaat
gacttgaagcaattagaaactttcttttacaagctcagctttttcttgcacatattagat
tactcggcaagtattggcattctgactgatctggggttcttgtggtttagagaattttac
ctggagtcttcacgtgttattcagttcccgatcgagtgttcactaccatggatgctgata
gactacattctggaatcccagaattcaggccttcttgagagtgttctgctgccttttgac
atttataatgactcagctcaacaagctctggttgttctgaggcagagattcctctatgat
gaaattgaagctgaggtggaccatggttttgatatatttgtttcaaggctctcggagtct
atattcacatattacaagagttggtcagcgagtgagcttcttgatccatcgtttctcttt
gcgttggacaatggtgaaaagttctccatccagcctgtgaggtttactgcgttatttaaa
atgacaaaagtaaagatacttggtagaacaattaatttaagaagtttgatcgctcagagg
atgaataaaatctttagagagaacctcgagtttctttttgaccgttttgagtcccaggac
ctatgtgctgtagtggaattggagaagctgatagatatcctaaagcactcgcatgaattg
ctttcacaagatatttccatagatcctttcagcctcatgttgaatgaaatgcaagaaaac
atttctcttgtctcattttcaagtcgacttgctacacagatctggtcggagatgcagagt
gatttcctaccaaacttcattctttgcaataccacacagcgatttgtccgttcatcgaaa
gttcctcctactcagaaaccatcagtgccttctgctaagcctagtttctattgtggcact
caagacttaaatgcagctcatcaaagttttgcacgattgcatagtggattttttgggata
ccacatttattttccatagttaaacttcttggatccagatcattgccttggctaataaga
gctttgctggaccatatatcaaataagataacaacacttgagccaatgatctctggattg
caagaagcaatgcccaagtctattggtttgctttcttttgatggtggtgttacaggttgt
atgaagcttatacgagagcaactaaactggggcagtaagtcagaactcaagtcagaagtt
ctacgaggaataaaggaaattggaagtgttatatatacaatgggacttctcgatatcgta
ttgagagagatagacacaaagcgtttcatgcaaacagctccatggttgggattaatcccg
ggtgctgaaggacagatagttaatgctcaagacggtgaaagccctcttgtcaatctctta
aagtcagcaacttctgcagttgtctcaagtcccggttgtctgaatccagcagcgttctac
actatgtccaaacaggcagaagctgcagatcttttgtataaggcgaacatgaacggtgga
agcgttcttgaatacacacttgcattcaccagtgcgtcactcgacaaatattgtagcaaa
tggagtgctcctccaaagacgggcttcattgatatcacaacttcaaaggatttttaccgt
atatacggtggtctgcagattggatatctggaggaggtaacagctccacagtcagctcaa
catgaagtgcttggtgactcgatagcttggggtggttgcaccattatatacttgctcggc
cagcaacttcactttgagttgtttgatttctcgtaccaagtactcaatgtctctgaggtt
gaaactgtctctgcttcacatactcataggcatcctcagatccatcagggatgggaaggt
ttgttggaagggatgaagaaagctcggaggctgaataatcacgtcttctccatgcttaaa
gctcgttgtcccctagaagacaaaacggcttgtgctatcaaacagagtggcgcgccgctc
ccacgtgtcaggtttgagaatactgtatctgctttcgagactctacctcagaaaggcacc
gttggctga
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