Camelina sativa (false flax): 104770169
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Entry
104770169 CDS
T05044
Name
(RefSeq) GATA zinc finger domain-containing protein 14-like isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104770169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104770169
03019 Messenger RNA biogenesis [BR:
csat03019
]
104770169
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104770169
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104770169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
104770169
NCBI-ProteinID:
XP_010492846
UniProt:
A0ABM0XYJ2
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All DBs
Position
20:9208528..9211872
Genome browser
AA seq
480 aa
AA seq
DB search
MRPPFNSFQPQGRPHRPQQQQHQNNGYSNQHQRNGYQNPMETNQLRMMNPHMMSNPMMGH
MNNPMPMPNMPMHPQFFNNLSNMPQHQQQLHQFAAMPNNINQLLPNLLGNLQFAVANSNL
MAHSLPLVQPQFFQPQLNSFNPRPYPPVPNPHQNHQLQPPGFSEPRPLGQTGGIVDNTNG
SGPKGNDFRNKFTKHQKFNGAGQGFQRSQLHQADNGKRKSGFNKDHKGKGNYNKMTTGFN
GSDAGNIASEKKRSFALVYTPKEIKQWRESRRKNYPTKLNVAKKVKKNASESILDEEAKM
RRQQLQEVLAKQAELGVEVAEVPSHYLSNTDEQVNGDGGNNNGKNQYNDGRKGRFQNNRQ
RKRRPDRKDKSVKKTRFEDKTSSQESSVITREPTLLEKLLSGDKKRDKSQLLQVIRFMVM
NSLFKEFPEQPLKLPLITVEETGCEHAREDEVSLCDDLSDDDDDDLDVNGDDNPCDEDVD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctccgttcaattccttccagcctcaaggtcgtcctcatcgaccgcaacagcaa
caacaccagaacaatgggtattctaatcagcaccaacgtaatgggtatcagaacccaatg
gaaactaatcaattaagaatgatgaatccacatatgatgagtaatccaatgatgggtcac
atgaacaatcctatgcctatgcccaatatgccaatgcatcctcagttctttaacaatctc
tccaatatgcctcaacatcaacagcaacttcatcagtttgctgctatgcccaacaatatc
aaccagttactccctaacctcttggggaatcttcagtttgcagttgctaatagtaatctt
atggctcactcactccccttagttcagccccaatttttccagccacagcttaattccttt
aacccccgtccttatccaccagttccaaatccccatcaaaatcatcagttacagcctccg
ggtttctcagagccaagaccactggggcagaccggaggaattgttgataataccaatggt
tccggtcctaaagggaatgattttcgaaataagtttacaaaacatcaaaagtttaatggc
gctggtcaaggattccagagatctcagttgcatcaagcagataatggaaagaggaagtct
ggattcaataaggatcacaagggcaaagggaactataataagatgacaactgggttcaat
gggtctgatgctggtaacatagctagtgagaagaaaagatcatttgctttggtctataca
ccaaaagaaattaagcaatggcgtgaatctcgccgtaagaattatccaacgaaactcaat
gttgcgaagaaagtaaagaaaaatgcttcagaaagcatccttgatgaggaagcaaaaatg
cgtcgtcagcaactccaggaagttttagcaaagcaggctgaattaggtgttgaagttgca
gaagttccttcacattatttatccaatacagatgaacaagttaatggagatggaggaaac
aacaatggaaaaaatcaatataatgatggacgaaaaggaagattccagaataatagacag
agaaagagaagacctgatagaaaagataagtctgttaagaaaacaagatttgaagacaaa
acttcatctcaagagtcttccgtgataacgagagaacctacattgcttgagaagctccta
agcggagacaaaaagagagacaaaagccaactattacaggtaatccgcttcatggtaatg
aattcattattcaaggagtttccagagcaaccactgaagttgccattgattacggttgaa
gaaactggctgcgaacatgctagggaagatgaagtttctttatgtgatgaccttagtgat
gatgatgatgatgatcttgatgtgaatggtgatgataacccatgtgatgaagatgttgat
tga
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