Camelina sativa (false flax): 104770192
Help
Entry
104770192 CDS
T05044
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR17 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104770192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104770192
03036 Chromosome and associated proteins [BR:
csat03036
]
104770192
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104770192
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104770192
RSF complex
104770192
WICH complex
104770192
B-WICH complex
104770192
NORC complex
104770192
BRF complex
104770192
NuRF complex (fruit fly)
104770192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
104770192
NCBI-ProteinID:
XP_010492878
LinkDB
All DBs
Position
20:complement(9330377..9337848)
Genome browser
AA seq
1074 aa
AA seq
DB search
MARASKREVSSDEAYSSEEEEQVNNNQPNVEDDDEELEAVARSAGSDEEDVAPDEAPASD
DEVVPAEDDGEEDEEDGEKAEISKREKARLKEMQKMKKQKIQQILDAQNASIDADMNNKG
KGRLKYLLQQTELFAHFAKSEPSPSQKKGKGRGRHSSKLTEEEEDEECLKEEEGGIGGSG
GTRLLTQPACIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEY
RGISGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVT
SFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLH
ELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP
PKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAE
PGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYC
RIDGNTGGDDRDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDL
QAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDE
LLQMVRYGAEMVFSSKDSTITDEDINRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSAD
FYDFDDDNKDENNKLDFKKIVSENWNDPPKRERKRNYSETEYFKQTLRQGAPAKPKEPRI
PRMPQLHDFQFFNTQRLTELYEKEVRYLMQTHQKTQTKDTIEVDEPEEVGDPLTAEEVEE
KELLLEEGFSTWSRRDFNTFLRACEKYGRDDIKSIASEMEGKTEEEVERYAQVFQERYKE
LNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDR
FMICMVHKLGYGNWDELKAAFRTSPVFRFDWFVKSRTSQELARRCDTLIRLIEKENQEYD
ERERQARKEKKLAKSATPSKRPSGRQANESPSSILKKRKQLSMDDYVSSGKRRR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggcttcgaagcgtgaggtttcttcagacgaagcttactcttctgaggaggaa
gagcaagttaacaacaatcagcccaatgtggaagatgacgatgaggagctcgaagccgtc
gctcgctctgcgggctctgatgaggaagatgttgcccctgacgaagcaccagcttctgac
gacgaggttgtccctgctgaagatgacggcgaagaggacgaagaagatggggaaaaagct
gaaatcagcaaacgtgagaaggccaggcttaaagaaatgcagaagatgaagaagcaaaaa
attcagcaaattttagacgcccaaaatgcttccatagatgcagatatgaacaataaaggc
aaggggagattgaagtaccttctgcagcaaactgagttatttgcccattttgctaaaagt
gaaccatctccgtcccagaagaaggggaaaggaaggggtcgtcattcttccaaactaact
gaagaagaggaagatgaagagtgtttaaaagaagaagagggtggtataggtggatctgga
ggcacacggttgctcacacagcccgcttgtattcaggggaagatgagagattaccagcta
gctggtttaaactggctcattcggttgtacgagaatggcataaatgggattcttgcagat
gaaatgggtctggggaagacgcttcaaacaatttctttgttagcttacctgcatgagtac
aggggaattagtggccctcatatggtggttgctccaaaatcaacccttggtaactggatg
aatgaaattcgccgattttgtcctgtcctgcgtgctgtgaaattcctcggtaatcctgag
gaaaggagacatattcgcgaagaattgctagttgcgggaaaatttgatatttgtgtgaca
agctttgagatggctatcaaagagaagacaacattgcgccgtttcagctggcgttatata
atcattgatgaagcacatcgaatcaagaatgagaattcacttctttcaaaaaccatgaga
ctttttagcactaattatcggcttcttatcacgggaactccccttcagaataatctccat
gagttgtgggcccttctcaattttcttctccctgaggtatttagttcagcagaaactttt
gatgaatggtttcaaatttctggtgaaaacgaccagcaagaagttgttcaacaacttcac
aaggttctccgaccatttcttcttcgaaggttaaaatcagatgtagagaaaggccttcct
ccaaaaaaggagacaattcttaaagttggcatgtctcaaatgcaaaaacaatactacaag
gctttactgcagaaggatcttgaagtggttaatggtggtggagaacgcaaacgtctgttg
aacatagcaatgcaattgcgcaaatgctgcaaccacccttatctcttccaaggtgcagag
cctgggcccccctataccacaggagatcaccttgtaacaaatgcaggtaagatggttctc
ttagataaattgctgcctaagttgaaggatcgtgattcaagggttctgatattttctcag
atgacaagactattggatattcttgaggattatctaatgtatcgtggttaccagtactgc
cgtattgatggaaatactggtggtgatgatcgagatgcttccatagaagcctacaacaag
ccaggaagtgagaaatttgttttcttgttatccactagagctggagggcttggtatcaat
cttgctactgcagatgttgtgattctttatgatagtgactggaaccctcaagttgacttg
caagctcaagatcgtgcacataggattggtcaaaaaaaagaagttcaagtattccggttc
tgcaccgagaatgcaattgaggctaaagtcatcgagagagcttacaagaagttggcactt
gatgctctggttattcagcaagggcgattggcagaacagaaaactgttaataaggatgag
ttacttcaaatggtgagatatggtgccgaaatggtgtttagttcgaaagatagcactatt
acggatgaggatattaacagaatcattgccaaaggagaagaggcaacagctgaacttgat
gctaagatgaagaagttcactgaagatgcaatacagtttaaaatggatgacagcgctgac
ttttatgattttgacgatgacaataaggatgagaacaacaagctggattttaagaagatt
gtgagtgagaattggaatgatccaccaaaaagagagagaaagcgcaactactctgaaact
gaatacttcaagcaaacactgagacaaggtgctccagctaaacctaaagagcctagaatc
ccacgtatgccccaattgcatgattttcagttctttaacactcagcgattgaccgagctg
tatgaaaaagaagtgcgataccttatgcaaacacatcagaaaactcagacgaaagacaca
attgaagtcgatgaacctgaagaagttggagatcccttaactgctgaagaagtggaagaa
aaggaactattgctggaagagggtttctcaacatggagcagaagagacttcaataccttc
cttagggcctgtgagaagtatggccgggacgacataaaaagcattgcctctgagatggaa
gggaaaacagaggaagaggttgaacgatatgctcaagttttccaagaacgatataaggag
ctgaatgattatgatagaatcatcaagaatattgagaggggagaagcaagaatctctagg
aaagatgaaatcatgaaagctattgggaagaaactggatcgctacagaaacccgtggctg
gaactgaagattcagtatggtcagaacaaagggaaactgtacaatgaagagtgcgaccgc
ttcatgatatgcatggtccataaacttgggtatggaaactgggatgagctgaaggcggcg
tttcggacatcccctgtgttcaggtttgactggtttgtaaaatcccgcacaagtcaggaa
cttgctaggagatgtgacacactgatccggttgattgagaaagagaaccaagaatatgat
gagagggagaggcaagcccgcaaagaaaagaagcttgcaaagagtgcaacgccatcaaag
cgaccttcgggtaggcaagcaaatgagagcccctcatctattctgaagaaacgaaagcag
ctgtcaatggatgattatgttagctcgggaaagcgtaggagataa
DBGET
integrated database retrieval system
