Camelina sativa (false flax): 104770224
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Entry
104770224 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104770224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104770224
03110 Chaperones and folding catalysts [BR:
csat03110
]
104770224
03029 Mitochondrial biogenesis [BR:
csat03029
]
104770224
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104770224
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104770224
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104770224
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104770224
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104770224
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104770224
Exosomal proteins of other body fluids (saliva and urine)
104770224
Exosomal proteins of breast cancer cells
104770224
Exosomal proteins of colorectal cancer cells
104770224
Exosomal proteins of bladder cancer cells
104770224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AUDH_Cupin
Motif
Other DBs
NCBI-GeneID:
104770224
NCBI-ProteinID:
XP_010492918
LinkDB
All DBs
Position
20:9524958..9527716
Genome browser
AA seq
576 aa
AA seq
DB search
MLAAVSPSSFSPTIISPSRNSQRNNPRKFSVVRAGSKRILYGKDSREALQAGIDKLADAV
SVTLGPRGRNVVLAEKDTIKVINDGVTIAKSIELPDTIENAGATLIQEVAVKMNESAGDG
TTTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVRVLMVKSVPVKGKSDVKAVA
SISAGNDEFVGNLIAETVEKIGPDGVISIESSSTSETSVIVEEGMKFDKGYMSPHFITNQ
EKSTVEFDKAKILVTDQKITSAKELVPLLEKTSQLSVPLLIIAEDISAEVLEILVVNKKQ
GLINVAVVKCPGMLDGKKALLQDIALMTGADYLSGDLGMSLMGATSDQLGVSRRVIITAN
STTIVADDSTKPEIQARIAQMKKDLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETE
LEDRKLRIEDAKNATFAAMREGIVPGGGATYIHLLDEIPRIKKNILEDSYEQIGADIVAT
ALTAPAMAIATNAGVDGLVVVEKTRELEWRSGYNAMSGRYEDLLNSGIADPCRVSRFALQ
NAVSVAGIVLTTQAVLVDKIKQPKPAVPQVPGIPTT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttagccgccgtatcaccgtcgtctttctcgccgacaatcatttctccgagccgtaat
agtcagaggaacaacccaagaaaattctcagtggtgagagcaggatccaagagaatactc
tacggtaaagatagcagagaagcactacaagccggtattgataagttagctgatgctgtt
tccgttactttaggccctagagggcgtaatgtagtgttagctgaaaaagacacaatcaaa
gttattaacgatggtgttaccattgctaaatctattgagcttcctgatacgattgagaac
gctggagcaacgttaattcaagaggttgcggttaagatgaatgaatcagcgggtgatggg
acaacaactgcaatcattttggctagagaaatgatcaaggctggatctttggctattgct
tttggagctaatgctgtttctgtgaagaatgggatgaacaagactgttaaagagttggtc
agggtgttgatggtgaaaagtgttcctgtcaaagggaagagtgatgttaaagccgtggcg
tcaatctctgctggcaacgatgaatttgtggggaacttgattgctgaaactgtggaaaag
attggccctgatggcgtcatctccattgaatcatcttccacatcagaaacgtctgttata
gttgaggaagggatgaagtttgacaagggctatatgtcgcctcatttcatcacaaatcag
gagaaatctactgtggaattcgacaaagctaaaatccttgtgacggatcagaaaatcact
tcagccaaggaattagttccgttactggagaaaacttcacaactcagtgttccactcctt
ataattgcagaagatatatccgcggaagtgcttgagatactggtggtgaacaagaagcaa
ggtttgattaatgttgctgttgtgaaatgtccaggaatgttggatgggaaaaaggctttg
ctacaagacattgcactcatgacaggagctgattatctttccggagatttaggcatgtct
ctcatgggtgcaacttcagatcagctaggtgtttctcggagagtaataattacagctaat
tcgacaactatagtcgcagacgattcaactaaaccggagattcaggcaagaattgctcag
atgaagaaggatctagctgagacagataattcatatctttcaaaaaagatcgcagagaga
attgctaagctcacaggaggtgtggctgtaattaaggtgggaggtcacactgaaacagaa
cttgaggacagaaaacttagaatagaggatgcgaagaacgctacatttgcagccatgaga
gaaggtatagttccaggtggtggtgccacatatattcatcttttagatgagatcccgaga
atcaagaagaatatactggaagattcatatgaacagataggtgcagacattgtagcgacg
gcgctcacagcacctgcaatggccatagcaaccaatgccggggttgatggattagttgta
gtggagaaaaccagagagctcgaatggagaagtggttacaacgcaatgtctggaaggtat
gaagatcttctgaactctggaatagcagatccttgtcgggtttcaagattcgccctccaa
aatgcggtttctgttgccggcatagttctcacgactcaagctgtgcttgtggataagatc
aaacagcctaaacctgccgttcctcaagttccaggcatacctaccacataa
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