KEGG   Camelina sativa (false flax): 104770522
Entry
104770522         CDS       T05044                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03030  DNA replication
csat03410  Base excision repair
csat03420  Nucleotide excision repair
csat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104770522
   03410 Base excision repair
    104770522
   03420 Nucleotide excision repair
    104770522
   03430 Mismatch repair
    104770522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csat03032]
    104770522
   03400 DNA repair and recombination proteins [BR:csat03400]
    104770522
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104770522
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104770522
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_22 PTCB-BRCT AAA_19 AAA_30 RCF1-5-like_lid Rad17 AAA_18 AAA_5 AAA_assoc_2 nSTAND3 BRCT_2 RuvB_N AAA_28 AAA_24 Gp44_lid Zeta_toxin AAA_17 AAA_14 NTPase_1 AAA_2 Sigma54_activ_2 TsaE RsgA_GTPase DNAX_ATPase_lid
Other DBs
NCBI-GeneID: 104770522
NCBI-ProteinID: XP_019097922
LinkDB
Position
20:complement(11584835..11591674)
AA seq 958 aa
MSDIRKWFMKAHEKGNGSAPKSTSSKTGAVKSAAETAPIKSEQASGDLETAARRKTSKYF
GKEKTIVKDEKEVEELPAKRKLKTESDDLSKPRPRKVTKVDDDDDDFDVPIPRKTRDSTP
SKKLKSGSGRGIATKTDKDEDDDGEDAQEKETPLKSGGRGRGGRAASGAPTAGRGRGGGR
GGFMNFGERKDPPHKGEKEVPEGTPDCLAGSTFVISGTLDSLEREEAEDLIKRHGGRITG
SVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPIKKSLPERTNKGTEK
VCAPPKTSPQKEVTRGKPLAKSSPNKVPPAKGKKKIIETSLPWTEKYRPKVPNEIVGNQS
LVTQIHNWLSHWHDQFGGTGSKGKGKKVNDAGAKKAILLSGTPGIGKTTSAKLVSQMLGF
QTVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAMAANMDRSKHPKTVLIMDEVDG
MSAGDRGGVADLIASIKISKIPIICICNDKYSQKLKSLVNYCLPLNFRKPTKQQMGKRLM
HIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSAIKYDDIRQRLLSSAKDED
ISPFSAVDKLFSYNGGKLRMDERIDLSMSDPDLVPLIIQENYLNYRPSGKDEAKRMELLA
RAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVFEQGERNFNRFGGW
LGKNSTAGKNRRLMEDLHVHVLASRESSSGRETLRVDYLPLLMNRLTSPLQTLPKDEAVS
EVVDFMNSYSISQEDFDTIMELGKFKGRANPMEGVPPPVKAALTKKYNELNKTRMVRVAD
MVQIPGMKKAPKKRIAAMLEPTADSLGDEDGEPLAENEEENASDAEEEDSEEANDGEKLE
SNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGKAADASAEKKATGRGSGTKRKR
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgtcggatattaggaagtggtttatgaaagcccatgaaaaagggaacggaagtgctccg
aaatcgacctcttccaagacaggtgctgtaaagagtgctgccgagactgcacctataaaa
tcagagcaggctagtggagacctggaaactgctgctagaagaaaaacgagcaagtatttt
ggtaaagaaaaaacgatagttaaagatgagaaagaggtggaagaattacctgccaagagg
aaacttaagactgagtctgatgatttaagcaagccccgtccaagaaaggttaccaaggtt
gatgatgacgatgacgattttgatgtacctattccaaggaagactcgtgatagcacaccc
agcaaaaaactaaagtcggggtcaggtagaggaatcgcaactaaaactgataaagacgag
gatgatgatggtgaagatgcccaagaaaaggagactcctctgaaatcaggtggaagaggc
cgtggcggtagagctgcatcaggggccccaactgctggaagaggaagaggtggagggcga
ggtgggtttatgaattttggtgaaaggaaagacccaccgcataaaggggaaaaggaagtt
cctgaaggcacccctgattgcttagctggatcgacatttgtaattagtggaacacttgat
agtttagaaagagaagaagcagaagatcttataaagcggcatggtggtcgtattacaggc
tctgttagcaagaaaacgacgtaccttttgtgtgatgaagatatcggcggaagaaaatct
gaaaaagctaaagagctgggcactaagttccttacagaggatggcctatttgacatgatc
cggtcctcgaaacccataaaaaagtctctgcctgaaaggactaacaaaggcactgaaaaa
gtctgtgcaccaccgaagacaagccctcagaaagaagtgacaagaggaaagcctttagca
aaaagttcgcccaacaaggttcccccagcgaaaggaaaaaagaaaattattgagacttcc
ttgccatggacggaaaaatacagaccgaaggttccaaatgagattgttgggaatcagtca
ctggtaactcagattcacaactggctgtcccactggcatgatcaatttggaggtactgga
agtaaaggaaagggaaagaaagtgaatgatgctggtgccaagaaggctatacttttgagc
ggaacacctggtattggaaaaacaacatcagcaaagttggttagtcagatgcttggtttc
cagacagttgaggttaatgctagtgacagtcgtggaaaggcgaactcgaatatcgccaaa
ggtattggtggtagtaatgcaaatactgtgaaggaacttgtcaataacgaagccatggcc
gctaacatggataggtcaaagcacccgaagactgttctaatcatggatgaagtagatgga
atgtctgcaggcgacaggggaggtgttgccgatcttattgctagcattaaaatatcaaag
attcctatcatctgcatttgtaatgacaaatacagtcagaaactgaagagtttagtaaac
tactgtcttcccctcaatttccggaagcccacgaaacagcagatgggaaaaaggctgatg
catattgctaaggcagaaggccttgaagttaatgaaattgccctggaagaactcgctgag
agagtaaatggtgacatacgtttggccctaaatcagctccaatatatgagcctgtccatg
tcagccatcaagtatgatgatatcaggcaacgcctgctaagcagtgctaaggatgaagat
atttcccctttctcagctgttgacaagttgtttagttataatggtgggaagctgagaatg
gatgaacggattgacctaagcatgagtgatcctgatttggttcctctaataatacaggaa
aactatctcaattataggccatcaggtaaagatgaggcaaaacgaatggagttacttgct
cgtgctgctgaatccattgcggatggagatattatcaacgtgcagattcgaagatacagg
cagtggcaactttctcagtcatgctgtgttgcatcttctattctcccagcttcattgttg
catggatcaagggaggtattcgagcagggtgagcgtaacttcaatagatttggtgggtgg
cttggcaagaattctacggcgggaaaaaatagacggttaatggaggatctgcatgttcat
gtccttgcttcccgtgaatccagctctggaagggagactcttcgtgttgattatcttccc
ctgctcatgaatcgcttgactagcccacttcagacgctgcctaaggatgaagctgtttca
gaagttgttgatttcatgaactcctactctataagtcaggaggactttgatactattatg
gagttgggaaaatttaagggacgtgcaaatccaatggagggtgttccacctccagttaaa
gcagctttgaccaaaaaatataatgagttgaataaaaccagaatggtacgtgttgctgac
atggtgcaaattccgggaatgaaaaaggcccctaagaagcgaatagctgcaatgctggaa
ccaactgctgatagtttgggagatgaggatggcgagccgttagcagaaaatgaagaagaa
aatgcatcagatgctgaagaagaagactcagaagaagcaaacgatggagaaaagctagag
tcgaatctaaagaatctgaatgctagagggatccaagttgaattggatttgaagggagct
gggagctctggttcaagaaaagcagctggtaaaggcagaggcagaggcaaagcagcagat
gcgtctgctgagaagaaagctacagggagaggttctggtaccaagagaaagagatga

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