KEGG   Camelina sativa (false flax): 104770978
Entry
104770978         CDS       T05044                                 
Name
(RefSeq) protein RRC1 isoform X1
  KO
K12842  U2-associated protein SR140
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104770978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104770978
Spliceosome [BR:csat03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104770978
 Complex B
    104770978
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SAP
Other DBs
NCBI-GeneID: 104770978
NCBI-ProteinID: XP_019097952
LinkDB
Position
20:complement(16288008..16297835)
AA seq 950 aa
MSSFSINRKKTPFQKHREEEEARKKKAEDETARLYQEFVESFQGDSATTKTFVRGGTINP
GEKPKVDSEGEKSKDGGSISKKGSRYVPSFLPPPLASKGKEPEKKREEERPKEREKGKTR
NIDHFMEELKREQELRERRNQDRDRQGDNSPSSRFDELPDDFDPSGRLGSFDDGDPQTTN
LYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTDEEKRRQRNCGFVSFMNRADGQAAK
DEMQGIIVYEYELKIGWGKAVSLPSQALPAPPPGHMAIRSKEGCNLVFSGQTGPPITAVP
NQNSELVLTPNVPDITVVTPEDEHLRHVIDTMALYVLDGECAFEQAIMERGRGNPMFKFL
FELGSKEHTYYVWRLYSFAQGDTLQRWRTEPYIMITGSGRWIPPPLPVSRTQEHEKESAS
TYAAGRSRRAEVERTLTDPQRDEFEDMLRNLTLERSQIKEAMGFALDNADAAGEVVEVLT
ESLTLKETSIPTKVARLMLVSDILHNSSARVKNASAYRTKFEATLPDIMESFNDLYRSIT
GRITAEALKERVLKVLQVWADWFLFSDAYIYGLRSTFLRSGVSGVTLFHSICGDAPEIEN
KSSVDNKSDIGKINPDAALAIGKGAARQELMNLPISELERRCRHNGLSLVGGRVMMVARL
LSLEDTEKQRGYEAVDEISKHHPQDHSTWEEVKSEREHIKNSYAEVEMKEPMNLPTTIPI
PQPELKAFVAKEKNDLILPASKWARDDDEADDEQKKSSSSGSDNTGGITFKADDEDLKGD
DCVRAQPDNGMDEEQRQKRRRIEVALIEYRETLEEQGMKNSEEIERKVEINRKRLEVDYG
LSGPNEGNRNQKSVIERKERRDDSRESSKKRQRGENKSQSPPRKSSTRERERDHDLDRDR
DRDRERHRDRDRQHDLNRDRDRREKSSSHDRDDHDRSKDRDRDWRRRGTR
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgagttcattctcgattaaccgaaagaaaacgccattccagaaacatagagaagaagaa
gaagctcggaagaagaaagctgaggacgaaacagctcgtttgtatcaagaattcgtggaa
tcgtttcaaggagatagtgcaactactaagacttttgttcgaggtgggacgattaatcca
ggagagaagcctaaggttgattctgaaggtgaaaagtccaaagatgggggttccatttca
aagaaggggagtaggtatgttccctctttccttccaccaccactggcatctaagggtaaa
gaaccggagaagaagagggaagaggagaggcctaaggaaagagaaaagggaaagactcga
aatatagatcatttcatggaggagttgaaacgtgaacaagaactgagagaaagacgaaac
caggatcgtgaccgtcagggcgataactcgccatctagccgctttgatgagctacctgat
gattttgatcccagtggaaggctaggatcgtttgacgatggtgacccacaaactacgaat
ctctatgttgggaatctttccccgaaggttgatgagaatttccttctgcgcacttttgga
agatttgggcccatagctagtgtcaagattatgtggccaagaacagatgaggagaagagg
cgacaaagaaactgtggctttgtttccttcatgaatagggctgatggacaagctgcaaaa
gatgaaatgcaagggatcatcgtgtacgagtatgaacttaaaattggatggggtaaagca
gtatctctaccatcacaagcattacccgctccaccacctggacatatggctattcggagt
aaggagggctgcaacttggttttttctggtcaaacgggtccaccaataactgctgttcca
aatcaaaactctgagctggttcttacccctaatgttccggatatcactgttgttactcct
gaggacgagcacctcagacatgtcattgatacaatggctctctatgttctggatggtgaa
tgtgcttttgaacaagctatcatggagaggggccgtgggaatccaatgtttaagtttttg
ttcgagcttggctcgaaggagcatacttactacgtctggagactctattcctttgctcag
ggtgatacacttcaaaggtggagaacagaaccgtatatcatgataactggtagtggaaga
tggataccgccacctctgcctgtatctaggacccaggagcacgaaaaagagtctgccagc
acatatgcagcgggaagaagcaggcgtgcggaagttgagaggactctgaccgatccccag
agggatgagttcgaagacatgttgcgtaaccttactttagaaaggagtcagattaaagaa
gctatgggtttcgctttagataatgcagatgcagctggagaggttgttgaagttttgacg
gagtccctgaccctaaaagagacctcaattccaactaaagttgctagactcatgcttgtg
tctgatattcttcataatagcagtgcacgtgttaaaaatgcatctgcgtaccgaaccaaa
ttcgaagcaactctacccgacataatggaaagcttcaatgatctgtatcgaagcataact
ggaagaattaccgctgaggctctaaaagaacgggttctcaaagtactgcaagtatgggca
gattggtttctcttttcagacgcatacatatatggactacgttccacatttctccggtca
ggagtatctggtgttaccttatttcattctatctgcggtgatgcacctgaaatagagaac
aaaagttccgttgacaacaagagtgatattggtaagatcaatccagatgctgcgctggca
ataggcaaaggagctgcaaggcaagagctgatgaatttaccgatctctgagcttgagaga
cgttgccggcacaatggactgtctcttgtaggaggtagagtaatgatggttgcccggcta
ctaagccttgaagacacagagaaacaacgtggctatgaagcagtggatgaaatttcaaag
catcatccgcaagaccattcaacttgggaagaagttaagagtgagcgggagcatatcaag
aacagctacgcagaagttgaaatgaaagagcctatgaatcttcccacgacaataccaatc
ccacagcctgagctgaaagcctttgtggcaaaagagaagaatgacctcatattgccagct
tcaaagtgggcgagagacgatgacgaagctgatgatgaacaaaaaaagagctcctcttca
ggaagtgacaatactggtgggataactttcaaggctgatgacgaggatctcaagggtgat
gattgtgtccgcgcccaacctgacaatggaatggatgaggaacaaagacaaaagcgtaga
cgcatagaagttgctttgatagagtatcgtgaaactcttgaggaacaggggatgaaaaac
tccgaggagatagagagaaaagtagaaatcaacagaaaaagacttgaagttgattatggc
ttatcaggacctaacgagggcaacagaaatcagaaatcagtaatagagcggaaggagagg
cgagatgattctcgagaatcttctaaaaagcggcaacgtggggaaaacaagagccaaagt
ccgccgcggaaatcatcgaccagggagagggagagagatcatgacctggacagagacagg
gatagggacagagagagacacagagacagagacaggcaacatgatttgaatagggatcgc
gaccgacgtgagaagagttcaagccacgatcgagatgatcatgatagaagcaaagataga
gacagggactggcgcagacgaggcacgagatga

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