Camelina sativa (false flax): 104771034
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Entry
104771034 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104771034
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104771034
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104771034
03036 Chromosome and associated proteins [BR:
csat03036
]
104771034
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104771034
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104771034
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104771034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
104771034
NCBI-ProteinID:
XP_010493808
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All DBs
Position
20:complement(17031381..17033837)
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AA seq
506 aa
AA seq
DB search
MFKQFLSKLPRKSSKSESGGGELNRSSSGQVPSPVQRSGAGSVVGSGPVRSNSGKRMSSA
VFPASVVAGIEPLVPFKDVPTSEKLNLFVSKVSLCCVTFDFSDPGKNSIEKDVKRQTLLE
LLDFVASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSSGGGGGGENDDDEPMFDPAWPH
LQIVYDLLLKFITSPCLDAKLAKKYLDHAFIVRLLDLFDSEDPRERECLKTILHRVYGKF
MVHRPFVRKSMSNIFYRFVFETEKHSGIAELLEIFGSIVSGFALPLKEEHKIFLWRVLIP
LHKPKSVGNYFQQLSYCITQFIDKEPKLGSVVIKGLLKFWPITNSQKEVMFLGEVEEILE
AMSVMEFQKIMVPLFLRIACCVTSSHFQVSERALFLWNNDQIVNLIGHNRQAILPIMFTA
LEKNAQDHWNQSVLNLTLNVRKMFCEMDEALFMSCHSRFKEDEAKQCSAAEKRKEVWERL
ENAASMKPVTGKTAVLVTPRATSIAC
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcagtttctgagtaagcttcctcggaagtcttcaaaatctgagtctggtgga
ggagagctaaatcgttcgagttccggtcaggttccttctccggttcagagatccggagct
ggtagtgttgttggttccggtccggttcgatctaactcagggaaacgtatgtcatctgct
gtgttcccagctagtgttgttgctgggattgagcctttggtaccgttcaaggatgtacca
acctcggagaaattgaatctctttgtgagtaaagttagtttatgctgtgtgacatttgat
ttctccgaccctggtaaaaactctattgagaaagatgtgaaaaggcagaccttgttggag
cttcttgatttcgttgcttcaggttctgttaagtttactgagccagctattctcgccatg
tgtagaatgtgtgctgtcaatctctttagggttttccctcctaattaccggtctagtggc
ggtggcggtggtggcgagaacgatgatgatgagccaatgttcgaccctgcttggcctcat
ttgcaaatcgtctatgatttgctgctcaagtttatcacttcaccttgtcttgatgctaag
ttggcaaagaagtatctagatcatgctttcattgtgaggttgcttgacttgtttgattcc
gaggatcctagagaacgggagtgtttgaagacgattctgcatcgtgtctatggtaaattc
atggttcacaggccctttgtccgcaagtccatgagcaatatattctaccggtttgtgttt
gagactgagaagcatagcggtatcgctgagcttttggagatttttgggagtatagtgagc
gggtttgctttgcctttgaaagaagagcacaagatcttcttgtggagagtgttgattcca
ttgcataagcctaagtctgttgggaactacttccagcagctatcttactgcatcactcag
ttcatagataaggagcctaaattgggtagtgttgtgataaagggtttgttgaagttctgg
cctatcacaaacagccaaaaggaagtcatgtttcttggggaggtcgaagagattttagaa
gcaatgagtgtgatggaattccaaaagattatggtccctctcttcttgcggattgcttgt
tgtgtaaccagttcccactttcaggtttctgaaagagctttattcttgtggaacaatgat
caaattgtgaacttgattggacacaaccggcaagccatcttaccaatcatgttcactgcc
ttagaaaagaatgctcaagaccactggaaccaatccgtactaaacttaaccttaaacgta
agaaaaatgttctgtgaaatggacgaggctctgttcatgtcttgccactcccgctttaag
gaggacgaagcaaagcaatgttctgcagcggaaaagaggaaagaagtttgggaaaggcta
gagaacgcagcaagtatgaagccggtaacaggaaagacggctgttctggtaactcctcga
gcaacctccattgcctgctaa
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