Camelina sativa (false flax): 104771053
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Entry
104771053 CDS
T05044
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104771053
03012 Translation factors [BR:
csat03012
]
104771053
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104771053
Translation factors [BR:
csat03012
]
Eukaryotic type
Initiation factors
eIF-3
104771053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Tricorn_2nd
Beta-prop_ELP1_1st
RRM_1
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
104771053
NCBI-ProteinID:
XP_010493833
UniProt:
A0ABM0Y104
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All DBs
Position
20:complement(17298805..17302408)
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AA seq
713 aa
AA seq
DB search
MVAAVDIDGRAAQLGINWSEINLDSIQLPPGDDFGIASDDEAVYHDDQSEFDTGFGNIIV
VDHLPDVLREKYEKLEGVVKKIYNQLGVIRENGLWMPVGPDTKTLGYCFIEFNTAQEAQN
AKEKTHGYKLDKSHIFDVNKFDDFDRLMNVKEEWEPPQARPYSPAENYQKWLTDEKARDQ
LVIRHGADTEVYWNDPRQKKPEPVHKRPYWTESYVQWSPLGTYLVTLHKQGAAVWGGADT
FTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGS
ADEFSIGGPGGVAGASWPVFRWAGGNDDKYFAKLSKNTISVYETETFSLIDKKSIKVDNV
VDICWSPTDSILSLFVPEQGGGNQPAKVALIQIPSKVELRQKNLFSVSDCKMYWQSSGEY
LAVKVDRYTKTKKSIYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHG
DQPRPDVSFYTMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFN
VDELETMATAEHFMATEIEWDPTGRYVATAVTSVHEMENGFTIWSFNGNLLYRTLKDHFF
QLAWRPRPPSFLTAEKEEEIAKDLKKYSKKYEAEDQDVSLLLSEQDREKRKALKEEWEKW
VMQWKSLHEEEKLARQNLRDGEVSDVEEDEYEAKEVEFEDVIDVTEEIVQESM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggccgttgatatagatggccgagcggctcagttagggattaattggtctgag
attaatctcgattccatccaacttccccctggagacgattttgggatcgcgagtgatgat
gaagcagtataccacgatgatcagtcagaattcgacactggattcggtaacataatcgta
gtagatcacctccctgatgttctcagagagaagtatgagaaacttgaaggtgttgtcaag
aaaatttacaaccagttaggtgtgatcagggagaatggactgtggatgcccgttggaccc
gataccaaaacattgggctactgttttattgagttcaataccgctcaggaagcgcaaaat
gctaaggaaaagactcatggctacaagctggacaagtctcatatctttgatgtaaacaag
tttgatgatttcgacaggttgatgaatgtgaaggaggagtgggagcctcctcaggccagg
ccttattcccctgcggaaaattatcaaaaatggcttactgatgagaaagcccgggaccag
ctagtcattcgtcatggcgctgatactgaagtttactggaatgatcctaggcagaagaag
cctgaacctgttcataagcgtccttattggacagagagttatgtgcagtggtctcctcta
ggtacataccttgtgacacttcacaagcaaggagcagctgtttggggtggtgctgataca
ttcacgcgtctcatgcgttatcagcattctatggtaaaactagttgacttctcgccaggt
gagaaatatctggtaacttaccatagccaagaaccaagcaacccacgagatgcaagtaaa
gtagagattaaggtctttgatgtgaggaccgggaggatgatgagagatttcaagggtagt
gctgatgagttttcaattggaggacctggtggtgttgctggtgcctcttggcctgttttc
agatgggctggtggaaatgatgataaatactttgccaagcttagcaaaaacactatctct
gtctatgagactgagactttcagcttaatagacaagaaatccattaaggtcgataatgtt
gtggatatctgctggtctcctactgattctatcctttcattgtttgttcctgaacaaggt
ggtggaaaccaacctgccaaggttgctctaatccaaatcccgagcaaggtggagttgagg
cagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtggagagtat
cttgctgtcaaggttgatcgatacacaaaaactaagaagagcatatactctggatttgag
cttttccgtatcaaagagagggatattcccattgaggttcttgagctggacaacaagaat
gacaagatcattgctttcgcgtgggagcccaagggtcacaggtttgctgtgattcatggt
gaccaaccaagaccagatgtcagtttctacacaatgaagactgcacaaaacactggaagg
gtttcaaagctcgcaactttgaaggccaaacaagccaatgccctcttctggtcccccact
ggcaagtacatcattcttgctgggttaaagggattcaatggccagcttgaattcttcaac
gtggatgagctcgagacaatggccacagccgaacacttcatggccacggaaatcgaatgg
gacccaactggaaggtacgttgcaactgcagtgacatcagtccacgagatggagaatggg
ttcaccatatggtctttcaacgggaatttgctttaccgaacactgaaggatcatttcttc
cagttggcttggcgtccaagaccgccatcattcttgactgcggagaaggaagaagagata
gcaaaggacctgaagaagtacagcaagaagtacgaggcagaggatcaggacgtgtcgttg
ctgttgagcgaacaagacagagagaagaggaaggcactgaaggaagaatgggagaagtgg
gtgatgcagtggaagtctcttcatgaagaggagaaactcgcgaggcaaaatcttcgggat
ggtgaagttagtgatgtggaagaagatgagtatgaagccaaagaagttgagtttgaggat
gttatcgatgtaaccgaggaaatcgttcaagagtccatgtaa
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