Camelina sativa (false flax): 104771058
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Entry
104771058 CDS
T05044
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104771058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104771058
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
RNases
104771058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF8085
Motif
Other DBs
NCBI-GeneID:
104771058
NCBI-ProteinID:
XP_010493835
UniProt:
A0ABM0Y106
LinkDB
All DBs
Position
20:complement(17310944..17314265)
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AA seq
568 aa
AA seq
DB search
MSSSKRKRDAEDGGESGDGSDVKSNTGNSFFDIYGPEAKAELDFKSPETTLNLQDVQGLV
TWVLAEGYMPSWVFIKNKPLIPKVVMLYLPGLDAALYLSQSKALASLKSCCGNPVALLAL
SSVVDDMRTIDTILTCKVKRKKTVTSSVEPPPLVSSPEARNLMGKSFIEIIKDIPFPVAY
YTLSRKEMELNGYTFEQFEFTPTLPAPPGTSFHEIVALDCEMCITKEGLELTRVTLVDIQ
GQVLLDKLVKPTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFFKLVFEETILVGHSLE
NDLFSLKISHNLVIDTALLYKHPHGRSYKTKLRILAKKFLAREIQLSESGHDSVEDAKAA
MDLALLKIKHGPDFGSPPEVRRKKLLAILNESGKSTSMIDNINIVKRYASESSNSIPVSC
DDEALSKAMKEVKNKRSQFVWTQFSELNTHFQSRANDPQNLNSRIAEMISLLTCNNNTSR
KKKNNVSLETKEILKKMNERVQSLYDALPTNAMFIVCTGHGDTSIVDRVRKMLKDENGIG
FDREKIVKVLEELQAQAEVALCFVGIKQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttcgaagcgaaagcgtgacgcggaagatggtggagaaagtggcgacggtagt
gatgttaagagcaataccggaaacagcttcttcgatatatatggacccgaagcgaaagca
gaactcgatttcaagagccctgaaacaacattgaacttacaagatgttcagggacttgtg
acatgggttcttgcagaaggttatatgccctcgtgggtgtttattaagaacaagcctctc
attccaaaggttgtgatgctttaccttcctggattggatgcagctttatacttatcacag
tctaaagcacttgctagtttgaaatcgtgttgtggcaatcctgtagcacttttagctttg
agctctgtagttgatgacatgaggacaattgatacaatccttacttgcaaggttaaaaga
aagaaaactgttacgagttcagtggaaccacctccccttgtatctagcccagaagcacgc
aatctgatggggaaatcgttcattgagatcataaaagacataccattccctgttgcatac
tatactctaagtcgaaaggaaatggaactaaatggatacacttttgaacaatttgagttt
acccctacacttcctgcaccaccaggaacatctttccatgaaattgtggctcttgattgc
gagatgtgtattacaaaggagggtttggagttaacaagagtgacgctggtcgatatccaa
ggacaggttctattagataaattagtcaagccaacaaatcctattactgattataacacg
aggtatagtggaataacagctgtgatgatggaaggagttacaacaactcttaaagatatt
caggaagagttctttaagctggttttcgaagagaccatattagtcgggcactccttggaa
aatgacttgttttctttgaagatctctcataatctggtgattgacactgcactactatac
aagcatccacatggtcgatcttataaaactaaacttcgaattctagcaaaaaagtttctt
gctagagagatacagctgtctgaatctggacatgacagcgtagaggatgcaaaagcagcc
atggatttggcactattgaagataaaacatggacctgattttggctcaccaccggaagtg
agaagaaaaaagctactcgccattttgaatgagagcgggaaatctacttctatgattgac
aatatcaacattgtgaagcgatatgcttctgagtcatccaattcaattccagtttcttgt
gacgacgaagcactttcaaaggccatgaaggaggtaaagaacaagcggtcacagttcgtt
tggacacagttctcagaattgaatacacatttccagagcagagcgaatgatccgcagaat
ctaaattccagaatagcggagatgatctcattgcttacatgtaacaacaacacgagccgc
aagaagaaaaacaatgtttcacttgaaacgaaggaaatcttaaagaaaatgaacgagaga
gtgcaatccctttacgatgcgttacccaccaatgcgatgtttatagtttgcaccggacac
ggagacacatccattgtagacagagtgaggaaaatgcttaaagatgagaatggaatcggg
tttgaccgtgagaaaattgtcaaggttcttgaagagcttcaagcacaagccgaagtagct
ctctgttttgttggtatcaagcaataa
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