Camelina sativa (false flax): 104771111
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Entry
104771111 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104771111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104771111
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104771111
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104771111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
104771111
NCBI-ProteinID:
XP_010493885
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All DBs
Position
20:17909966..17911710
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AA seq
324 aa
AA seq
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MVGASISASSGERAGSSSASYMVGASISASSGERADMVGASSPASTGERAGYRAGYSSAS
DMAGASSPASSGQRSDSSSTSVLRKRQTSSSVSPTHGARKRSKMEMDLEVLECPICFETL
TIPIFQCDNGHLACSFCCPKLSNKCPSCALPIGRIRCRAMESVLRSISIPCPNAKFGCTD
NVSYGLESTHVKECIFSQCSCPALDCDYTGSYEALWEHYCYDFCPAPSYESFTYHVSSTV
RMNISDKIKIKADYTKGLFFAVQCFREPNGVRVTVSCIAPSSPKVGKFSYHLSYTVDGDT
MTYESPDMKRILKVSFQTPLKKLC
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggttggagcctcgatttcggcatcttcgggagaaagagctggttccagcagtgcttct
tacatggttggagcctcgatttcggcatcttcgggcgaaagagctgacatggttggagcc
tcgagtccggcttctacaggcgaaagagctggttacagagctggttacagcagtgcttct
gacatggccggagcctcgagtccggcgtcgtcaggccaaagaagtgattccagcagtact
agtgtcttacgaaagagacaaacttcttcttcggtatctcccactcatggagcgaggaaa
cgctcgaagatggagatggatcttgaggttcttgagtgtcccatttgcttcgaaacattg
acgattcccatcttccagtgtgataatggacatttagcttgttccttttgctgtccaaaa
ctgagtaacaaatgcccatcttgtgctttgcctattggccgcattcgatgcagagcaatg
gagagtgtgcttagatcaatctctattccatgcccaaacgccaagtttggctgcactgat
aatgtctcttatgggttagaatcaactcatgtaaaggaatgcatcttctctcaatgctca
tgccctgcgttggactgcgattacactggctcatacgaagctctatgggagcactactgt
tatgatttctgtcccgctccctcatatgaatccttcacatatcatgtatcctctactgtt
cggatgaacatcagtgataagataaaaatcaaagcggattatacaaagggattattcttt
gcagtgcagtgttttagggagccgaacggtgtgcgtgtaactgtaagctgcattgcacca
tcttctccaaaagtaggaaagttctcatatcatctctcctacactgttgatggggacact
atgacttacgaatcaccagacatgaagaggattcttaaagtgagttttcaaacccctcta
aagaaattatgttga
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