Camelina sativa (false flax): 104771241
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Entry
104771241 CDS
T05044
Name
(RefSeq) protein HASTY 1-like
KO
K14289
exportin-5
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104771241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104771241
03036 Chromosome and associated proteins [BR:
csat03036
]
104771241
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
104771241
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
104771241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
104771241
NCBI-ProteinID:
XP_010494041
UniProt:
A0ABM0Y1I0
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Position
20:complement(19040554..19049844)
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AA seq
1201 aa
AA seq
DB search
MDVSTNSTASNVAQAILAVLDYNSTPDARKAAVAFLESIKSGDIRVLANISLLLVKKECS
SEIRLHAFKMLQHLVRLRWEELSPSERRDFAKLSVELMSEIASPCEEWSLKSQSAALVAE
IVRREGPDLWQELFPSLASLSAQGPLQAEVVSMMLRWLPEDITVHNEDLEGDRRRLLLRG
LTQSLPEILPLLYNLLERHFGAAMSEASRQQVDLAKQHAAVVIACLNAINAYAEWAPVLD
LSRYGIINGCGVLLSSHDFRLHACEFFKLVCSRKRPSDAPGSEFDSAISSLFQSLMNVSR
EFLYRSASNAGVIDESDYEFAECICESLVSLGSTNFQCIASDGGVLALYLQQMLGFFQHF
KLGLHYEAMHFWLALMRDLLSKPKAAAYLSGEGPAVGSSSHVESEKKKILSLINDDISCA
ILDVSFQRMLKKEKVPPRIALSLGPLELWSDEFDGKGDFGQYRSRLLELIKFIASHKPLV
SSTKIAERIITLIKDLLASPVPLQDVAVMDSLQLAFDCIVATVFDGSNEFAGGGSEVHFS
LRGIFEGLLQQLLSLKWTEPELIKMHAHYLDAVGPFLKYFPDAVGSVINKLFELLTSLPH
IVKDPATSTSRIARLQICTSFIRIAKAAEKSVLPHMKTIADTMAYMQREGTLLRGEHNIL
GEAFLVMASAAGAQQQQEVLAWLLEPLSQQWVQAEWQNNYLLDPMGFVRLCSNTPFMWSL
FHTVTFFEKALKRSGHGKSNLNTTSVKSQDLHPMAHHLSWMLPPLLKLLRVIHSLWSPSV
YQTLPPEMRAAMTMPDVERYSLLGEANPKLSKVSSVYADGSFDGGKDGQSEANEANVRNW
LKGIRDSGYYVLGLSTTIGDTFFKCLDANHVAVALMENLQSMEFRHIRQLIHAFVVSVVK
SCPADMWESWLEVLLQPLFIHCQQATSSSWASLMRDGRAQVPDSFGVQNGPDMKLEVMEE
KLLRELTREIATLLSTIASPGLNPGLPILEHPGHVGRVDMSTLKDLSAFRSNSIVGFLLN
HKNMALPALQICLEVFTWTDGEATTKVCCFCGVVVLLAILTNNVELREFVSKDLFYAVIK
GLAMESNAVNSADLVYLCREIFFYLADRDPAPRQVLLSLPCLTPNDLRAFEEAVAKTPSP
KEQKQLMKSLLLLGTGNNLRALAAQKTVNVITNVTLRSRGPANTSEAKENEGETIGLASV
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggatgttagcaccaattccacggcgagtaatgtcgcccaggcgattctcgctgttctc
gattataactctactcccgatgctcgtaaagccgccgttgcattcctcgaatctattaaa
tctggagatatcagggttctagcaaatatttccttacttctagtgaaaaaggagtgctct
tcggaaattcgactgcatgccttcaaaatgctacagcatttggttagactacgttgggag
gaattaagcccctcagagcgcagggattttgctaagctatctgttgaactaatgtccgag
attgctagtccgtgtgaggagtggtctcttaagagtcagtcagctgcccttgtagctgag
atagttagaagagaaggccccgatctttggcaggagttgtttccttcacttgcttccttg
tctgcacagggcccgttacaagctgaagtggtatcaatgatgttaagatggctccctgaa
gatataacagttcacaatgaggacttggaaggtgacaggcgtcggttattgttgcgggga
cttactcaatctcttcctgagattttgcctttattgtataatcttctcgagagacacttt
ggagctgcgatgagtgaagccagtaggcaacaggttgacttggcaaaacagcacgcagct
gtggttatagcttgtttaaatgccatcaatgcatatgccgaatgggctcctgttctagat
ctttccagatatggaattattaatgggtgtggtgtcttactttcttctcatgacttccgt
cttcatgcttgtgagtttttcaaacttgtctgctcaagaaaaagacccagtgatgctcct
ggttctgaattcgattctgcaatcagcagtctgtttcagagtctgatgaatgtctccaga
gaattcttatacagatcagcctcaaatgctggggttatagatgaaagtgattatgagttt
gctgagtgcatatgtgaaagtttggtttctttaggctcaacaaacttccaatgtattgct
agtgatggtggtgttctggctttataccttcaacagatgcttggtttctttcaacacttt
aagctgggtcttcactatgaagcaatgcacttctggctggcattaatgagggatttactt
tcaaagccgaaggctgctgcttatctaagtggagagggaccagcagttggtagttcaagc
catgttgagagcgaaaagaaaaagattcttagtcttattaatgatgatatctcttgcgca
atcttggatgtgtctttccagcgaatgctcaaaaaagaaaaagtccctccacgaattgct
ctttctcttgggccactggaactgtggagtgatgagttcgatgggaagggagactttggc
caataccgatcaaggcttttagaattgatcaagtttattgcttctcacaagccccttgtt
tctagtactaaaatagccgaaaggattatcactctcattaaggatctattggcatctcca
gtgcctcttcaggatgtagctgtgatggacagcctgcaattggctttcgattgtattgtg
gcgacggtgtttgatgggtcaaatgagtttgctggtggtggttctgaagttcatttttca
ctgcgtggaatatttgaaggcttgcttcagcagcttctctctttgaaatggactgagccg
gaacttataaaaatgcatgcacactatctggatgcagttggtcccttcctcaagtatttc
ccagatgcagttgggagtgttatcaacaaattatttgaacttcttacctctcttccacac
attgtcaaggatccagcaactagtacttcaagaattgcaagattacagatttgtacgtct
tttatacgaatagccaaagccgctgaaaaaagtgttctgcctcacatgaagactattgct
gatacaatggcatatatgcaaagagaaggaactttgctccggggggagcataacattttg
ggtgaagcatttcttgttatggcttcagcagcaggagctcaacagcagcaagaagttctt
gcttggttactggagccactgagccaacagtgggtccaagcagagtggcagaataattat
ctattagatcctatggggtttgttcgtctttgctccaacacgcccttcatgtggtctttg
ttccacactgttacattctttgagaaggctctcaagagaagtggacatggaaaaagcaac
ttgaatacaacctcagtaaaaagtcaagatttgcatcctatggctcatcatctatcttgg
atgttgccacctctcttaaaacttctccgtgttatccattccctttggtctccctcagta
tatcaaacactacccccagagatgagggcagcaatgacaatgcctgatgttgagcgatat
agtctccttggggaagcaaatcctaaattgtcaaaagtctcttcggtgtatgctgatgga
tcttttgatggtggtaaagacggacaatcagaggcaaatgaagccaatgtgcgaaattgg
ttgaaaggtatccgagatagtggatactatgtgttgggtctatcgacaacaatcggagat
acattcttcaaatgcctagatgctaaccatgtcgcagtggcactcatggagaacctacag
tcgatggagttcaggcacatacgacagcttattcacgcctttgtagtttctgttgttaaa
tcttgtccggctgacatgtgggagtcatggcttgaagtgctcctgcaaccgttgtttatt
cattgtcagcaagctactagctcctcttgggccagtcttatgcgtgacggcagagcacaa
gttccagattcgtttggtgtacaaaatgggcctgacatgaaacttgaagtaatggaagaa
aaacttctgagggaattaactagggagattgccaccctcctttcaacgatagcttctcct
ggtttaaaccctgggcttccaattttggagcatccaggccatgtgggccgtgtggatatg
tctactctcaaggatttgtcagctttcagatccaactctattgtgggtttcctcctaaat
cacaaaaacatggctctcccagcactgcaaatctgtttggaagtatttacatggacagat
ggggaagcaaccaccaaagtctgttgcttttgtggtgttgttgtccttctagcgattcta
acaaataacgtggaactcagagaatttgtgtcaaaagatttgttttatgcggtcattaaa
ggcttagccatggagtcaaatgccgttaacagcgctgatctagtttatctatgccgtgaa
atattcttttatctcgctgacagagacccagctccccgtcaggttttgctttcactccct
tgtctcactcccaacgacttgcgtgcttttgaagaagctgtggcgaaaactccaagtccc
aaggagcagaagcagctcatgaaaagcttgttgctgttaggtacagggaataacttaaga
gcgcttgctgctcagaaaaccgttaatgttatcaccaatgtcactttgaggtcacgtgga
ccagcaaacacttcagaagctaaagaaaacgaaggggaaacaattgggctggctagtgtt
ttatga
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