Camelina sativa (false flax): 104771566
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Entry
104771566 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104771566
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104771566
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104771566
03036 Chromosome and associated proteins [BR:
csat03036
]
104771566
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104771566
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104771566
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104771566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_5
AbiJ_NTD4
Motif
Other DBs
NCBI-GeneID:
104771566
NCBI-ProteinID:
XP_010494408
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All DBs
Position
20:complement(24028633..24033368)
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AA seq
539 aa
AA seq
DB search
MDIDGVTDAQILDHELLQLPGLSPVSLKANPHIADELFSQWLSLPETGRLVKSLIDDAKS
STPVSASKNCTNLNVACGSALPSVFMNSGTPPLSPRGSPGSPRFSRQKASPSSLHSPLKS
VREPKRQLIPQFYFQHGRPPAKELREQCISMVDQFFSNYIDGLHMDEFKSITKEVCKLPS
FLSPVLFRKIDTSCTGIITRDAFIKYWVDGHMLAMDLASQIYNILRQPGCKYLTQADFKP
VLDELLATHPGLEFLRNTPEFQERYAETVIYRIFYYINRSGTGCITLRELKRGNLIAAMQ
QVDEEDDINKVIRYFSYEHFYVIYCRFWELDGDHDFLIDKENLIKYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMSYEDFAYFILAEEDKSSEPSLEYWFKCIDLVGDGVITPNEMQFFY
EEQLHRMECITQEPVLFEDILCQIFDMIKPEKENCITLQDLKASKLSGNIFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAQREYVRLSMEEDVEEVSNGSADVWDEPLESPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatggtgtaaccgatgctcagattttggatcatgagctcttacagcttcct
ggtttgtctcctgtttcacttaaagctaaccctcatatcgctgacgaactcttctcccag
tggctttcactccctgaaactggccgtttggtcaagtctttgattgatgatgctaaatct
agcacaccagttagtgcatccaagaattgtaccaatctcaatgttgcttgtggaagtgca
ttgccatctgtgtttatgaacagtggtactcccccactatccccacgaggctcacctggg
tctcctcgtttctccaggcaaaaggctagcccttcttctctacattcccctctgaaatca
gtcagggaaccaaagcgtcaactcattcctcagttttacttccaacatgggcgtccacct
gcgaaagaactaagggagcaatgtatatccatggttgatcaattttttagtaactatata
gacggacttcatatggatgaattcaaatccattactaaagaagtctgcaagctgccttct
tttctttctcctgtactatttagaaagatagacacgagttgcaccggtatcattacaagg
gatgcatttatcaaatattgggttgatggacatatgttggcaatggacttagcctcacag
atatataatattttaaggcagccaggttgcaagtaccttacacaggctgacttcaaacca
gttcttgatgagcttctggcaactcatcctggcttggaattcctcaggaatactcctgag
tttcaagaaagatatgctgagaccgtcatctacagaatcttttactacataaacagatca
ggtactggttgcattactcttagagagctgaagcgtgggaatcttattgctgccatgcaa
caagttgatgaagaagatgacatcaataaagttattaggtacttctcctatgagcatttc
tacgttatatactgcagattttgggaactcgatggcgaccatgatttccttattgataag
gaaaatctcatcaaatatggtaatcatgctcttacctacaggattgtcgacagaatattt
tcacaggtccctaggaaatttacaagcaaagttgaggggaagatgagttatgaagatttt
gcatacttcattctcgctgaggaggataagtcatctgagcctagtcttgagtattggttc
aagtgcatagacctggttggtgatggggtgatcactcccaacgaaatgcaatttttctac
gaagagcagctgcatcgcatggagtgtataacccaggaacctgtactctttgaagatatc
ctatgtcaaatattcgacatgattaaaccagagaaggagaactgcatcacactccaggat
ctgaaagcatctaaactttctggaaatattttcaatatactctttaacctgaacaaattc
atggcatttgaaactcgtgacccgtttctcattcgccaggaacgcgagaatccaacattg
acagaatgggaccgatttgctcagagagagtatgtacggttgtcaatggaggaagatgtg
gaggaagtctcgaatgggagtgcagatgtttgggatgaaccactcgaatctccattttaa
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