Camelina sativa (false flax): 104771945
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Entry
104771945 CDS
T05044
Name
(RefSeq) transcription factor bHLH28-like
KO
K13422
transcription factor MYC2
Organism
csat
Camelina sativa (false flax)
Pathway
csat04016
MAPK signaling pathway - plant
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
104771945
04075 Plant hormone signal transduction
104771945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104771945
Transcription factors [BR:
csat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104771945
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_LHW
PAC_bac
bHLH_INO4
Spc24
RHG29_45_N
Motif
Other DBs
NCBI-GeneID:
104771945
NCBI-ProteinID:
XP_010494874
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Position
20:28745280..28746972
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AA seq
478 aa
AA seq
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MNTDDNLSMIEALLTSDLWPPLPPANHYLSLETTLQKRLHAVLSGTHEPWTYAIFWKPSY
FDLSGESVLKWGDGVYNGDDEEKTGRRLRRTIKKTILSSPEEKERRSKVLRELNSMISGE
PFPVVEEEDAKDDIDDVVEVTDTEWFFLVSMTWTFGNGSGLPGKAFTTYNPVWVTGSDQI
YGSGCDRAKQGGGLGLQTIVCIPSHNGVLELGSTEHIRQNSDLFNKIRFLFSFEGSKDCS
GAPTSVQFPSSVHKYSNTNPNPVSQPIQIHFSGEERKRSSDDWMDETVIPEKKPGKKRGR
KPMHGREKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVRYINELKSTA
ENAESEKNAVQNQLNELKKITGRQNATSSVCNDDKENVSDLKIEVKAMGSDVMIRVESGK
RNHPGARLMNALMDLELEVNHASISVMNDLMIQQATVKMGLRTYEQEQLRDMLKSKIN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgatgataacttatccatgatcgaagctctcttaacctccgacttgtggcca
cctttacctccggcgaatcattatcttagcctcgagaccactctccagaagcgtttacat
gctgtgttgagtggtactcacgaaccctggacttacgctattttctggaaaccctcctac
ttcgacctttccggcgaatcagttctcaaatggggtgacggagtttacaatggagacgac
gaggaaaaaactggacgaaggttgaggaggacgatcaagaagacgattctgtcgtctccg
gaggagaaagagcgtcggagtaaggttctccgggagcttaactcaatgatctccggtgaa
ccttttccggtggttgaagaagaagacgccaaagatgatattgacgacgttgttgaagtg
acggatacggagtggtttttcttggtttcaatgacgtggacttttggtaacggatccggg
ttaccgggtaaggcgtttactacgtataacccggtttgggttaccggttcggatcagatt
tacgggtcgggatgtgatcgggctaaacaaggagggggattagggttacaaaccatcgta
tgtattccttcgcataatggagtgttggagcttggatccacggagcacatccgtcaaaac
tcggatctttttaataagatccggttcctatttagtttcgaaggatccaaagattgttcc
ggagccccgacttcagttcagtttccctcaagtgttcacaagtactcgaacacgaatccg
aatccggtttctcaaccgattcagattcatttctccggcgaagagcgtaaacggagctca
gatgattggatggatgagacggtgataccggaaaagaaaccggggaaaaagcgcgggaga
aaaccgatgcatggtagagagaagccgttgaaccacgtggaagcggagaggatgagacgc
gagaagctaaaccatagattctacgcgttacgagcggttgtaccaaatgtatcaaagatg
gacaaaacgtcattgctcgaagacgcggttcgttacataaacgagctgaaatcaactgcc
gaaaacgcggaatcggagaaaaacgcggttcagaatcagctcaacgaacttaagaagata
acgggacgacaaaacgcgacttctagcgtttgtaacgacgacaaggaaaatgtatcggac
ttgaagatcgaagtgaaggctatgggaagtgatgtgatgataagagtggaatcgggtaag
agaaatcatcctggagcaaggttgatgaatgctttgatggatttggagttagaagtgaac
cacgcgagcatttctgtgatgaacgatctcatgatccaacaagcgactgtgaagatggga
ttgagaacctacgagcaagaacagcttagggatatgttgaaatcgaaaataaattaa
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