Camelina sativa (false flax): 104772028
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Entry
104772028 CDS
T05044
Name
(RefSeq) protein GLE1
KO
K18723
nucleoporin GLE1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104772028
03015 mRNA surveillance pathway
104772028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104772028
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104772028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DUF5401
DUF5427
Motif
Other DBs
NCBI-GeneID:
104772028
NCBI-ProteinID:
XP_010494974
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Position
3:complement(5922744..5926879)
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AA seq
612 aa
AA seq
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MGIVLEPRCPRNVDGISIDPEPNWNFHSLVSAIESVEKKLNAFSKFPQPITNSTSRMGRS
GGGFVMHVSEDEMESDEDEDEESEAEEEDKDYSQICTVGRRFAFDEIYLSDESDDEFDNE
PEYMMNKMGLAESALYDVNNNHQTEIKDDIRNQVTVVEMEIMNEVETSRSALARVEKYSE
TRKEVERKLDLQYQRKVAEALDTHLTAVQREHKIKSQIEERKIRSEEEARRRERAHQEER
TRQEKARVEAEMLAKSRAEEAKKEFERKAAKEVAEKEEADRKAAEQKLAEEKAVIERLSV
AGSSASSNAQAGGKSIQAAESALTLEKHRLKKLEELGAINQSLKSSSNKDFSSFEKHIAR
VIKQITVVKDNVSAKINEIVKIFKDPSCPVSISIAIFAKKMVSSGQNPFACSYVIVYVTS
QFPQAMDILLAEFHKACIYTVPKHIVNSQTAWDSEAYERLSSIMRLYGALVQTDIRGGNA
TNIHGIEHGWAWLARFLNNISANNRVTATALNAFLQTAGFGLHQRYKSQFVKVVNVVREH
FLQRLRAKKDTKDLQLIIAEIMAYLDDRMYLKEPEGRTMKASLLSTEITAELDHPQNNNQ
YYQRNNYRDNYY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgttttggaacctcgttgtccaagaaacgttgacgggattagtattgatcct
gagcctaactggaatttccatagcttagtatctgcgattgagtctgttgaaaaaaagctc
aatgccttttcaaagtttccccagccaattactaactcaacctcacggatgggaaggagt
ggtggaggatttgtaatgcatgtatcagaagatgagatggagagtgatgaagatgaagat
gaagagagtgaagcggaagaagaagacaaagattatagtcaaatctgtacagtggggaga
cgttttgcctttgatgaaatatacttgagtgatgaatctgatgatgagtttgataatgaa
cctgagtatatgatgaataagatgggtctggctgagagtgccctatatgatgtgaataac
aaccaccaaaccgaaattaaggacgacattaggaatcaagtaactgttgttgaaatggaa
ataatgaatgaggttgaaacgtctcgctctgcattagcccgggttgaaaagtacagtgaa
actcgaaaagaagtagaacggaaacttgatcttcaatatcagcgtaaagttgctgaagca
cttgacacccatctgactgcagtccaacgtgaacataaaattaaatcgcaaatagaagaa
agaaaaataaggagcgaggaggaagccaggaggagagaaagggctcatcaagaagagaga
acacgtcaagaaaaagctcgtgtagaggctgagatgttagcaaaaagcagagctgaagaa
gcaaagaaagaatttgagagaaaggcagccaaagaagtagctgaaaaggaagaagcagat
cgcaaagctgccgaacaaaaacttgcagaagagaaggctgtgatagagagacttagtgtt
gctggtagttcagcttcatcgaatgctcaagctgggggtaaatcaatccaagctgcagaa
agtgctttgacattggagaagcacagattgaagaagcttgaagagttaggagcaattaac
caatcgctaaaatcaagttcaaataaggactttagcagttttgaaaaacatattgcaagg
gtgataaagcaaataactgtggtaaaagataatgtaagtgcgaaaatcaatgaaattgtc
aaaatatttaaagaccctagttgtccggtatccatcagtattgcaatttttgcgaagaag
atggtctcctctggccaaaacccatttgcatgcagctacgtcattgtttacgtcacctcg
cagtttccacaagctatggatattcttcttgctgaattccacaaagcttgcatttacact
gtcccgaagcatattgtaaactcacagacagcttgggattcagaagcatatgaacgccta
agttccataatgaggctctacggtgcactagtccagactgatattcgaggtggcaatgct
actaacattcatgggatagaacatggatgggcttggttagccaggtttcttaacaatatc
tcagccaacaacagagttactgcaacagccttaaacgcctttctccagacggcagggttt
ggtcttcatcagcggtacaaatctcagtttgtgaaagttgtgaatgttgtgagagagcat
ttcttgcagagattgagggcgaaaaaggacacgaaggatctacaactgatcatagccgag
atcatggcgtacttagatgaccggatgtatctcaaggaacctgaaggaagaactatgaag
gcgagtctcctgtcgacggagattactgccgagttagatcatccgcagaataacaatcaa
tattaccagaggaataattacagagacaactactattga
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