Camelina sativa (false flax): 104772049
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Entry
104772049 CDS
T05044
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104772049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104772049
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104772049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
Sec3_C_2
Motif
Other DBs
NCBI-GeneID:
104772049
NCBI-ProteinID:
XP_010494999
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All DBs
Position
20:complement(29792564..29794890)
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AA seq
432 aa
AA seq
DB search
MEMESCKLFIGGISWETSEDRLRDYFQSFGEVLEAVIMKDRATGRARGFGFVVFAHPNVA
ERVVLLRHIIDGKIVEAKKAVPRDDHAVMNKSNSSLQGSPGPSNTKKIFVGGLASSVTEA
EFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLHKTFHELNGKMVEVKL
AVPKDMALNTMRNQLNVNSFGSSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRG
SFSPFGHGYGIELNFEPNQTQNYGSAGSSGGFGRPFSPGYAASLNRYGNQMELGGASVGN
GSVVNAATKNHMWGNGGLGYMSNSPISRSSFNGNSGMPSLGSIGDNWGAAARARSGYHGE
RGGVGLEAMRGVHVGGYSSGSSSLEADSLYSDSMWLSLPAKAEEGLGMGALDFMSRGPAG
YINRQPNGGIAA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaatcatgtaagctcttcatcggtgggatatcttgggaaaccagcgaagat
cgtcttcgtgattattttcaaagttttggtgaggttttagaggctgtcatcatgaaggat
cgagccactggtcgtgctcgtggctttggtttcgttgtcttcgctcatcccaatgttgct
gagagagtcgttttgcttagacatattatcgatggcaaaattgttgaggctaagaaggca
gttccaagagatgatcacgcagtcatgaacaaaagtaacagcagccttcagggatcacct
ggcccatctaacaccaagaagatctttgtggggggtttggcatcctctgtgacagaggct
gagttcaaaaagtattttgctcagtttggtatgatcactgatgttgtggtgatgtatgac
cacagaactcagcggcctagaggctttgggttcatctcatatgactctgaggaagctgtc
gacaaagtgctccacaagacattccacgaactcaatggtaagatggtggaggtcaaactg
gctgttcctaaggatatggctctcaacacaatgcggaaccaactgaatgtaaatagcttt
ggcagtagtagaatcagctcgttactgaatgagtacacccaagggttcagcccgagtcca
atctctggttatggagtaaaacctgaagttaggtacagtccagcagtaggtaataggggc
agcttctcaccgtttggacatggatatggcatcgagcttaattttgagccaaaccagact
cagaactatggatctgctggttctagtggaggctttggtcgaccctttagccctggatat
gctgcgagtctcaacaggtatggtaaccagatggagttgggtggagctagtgtcgggaat
ggttctgtggtaaatgcagcaacaaagaaccatatgtggggaaatggtggtcttggttac
atgtcaaactcgccgatatcaagaagcagctttaatggaaactctggaatgccttcacta
ggcagcatcggagacaactggggagcagctgcacgtgcacgtagtggctaccacggtgag
agaggaggcgtaggattagaagcaatgagaggagttcatgttggtggttacagcagcggc
tcaagtagcttggaggcagactctctgtacagcgactcaatgtggctttcactgcctgca
aaggcagaggaaggattggggatgggagcattggacttcatgtctagaggaccagctgga
tacatcaacaggcaaccaaacggaggaattgcagcttag
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