Entry |
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Name |
(RefSeq) pectate lyase 1-like
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KO |
|
Organism |
csat Camelina sativa (false flax)
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Pathway |
csat00040 | Pentose and glucuronate interconversions |
|
Brite |
KEGG Orthology (KO) [BR:csat00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104772174
Enzymes [BR:csat01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104772174
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
20:complement(3774157..3775497)
|
AA seq |
348 aa
MALVQLLIVLFVANVLEATKLNVMDKCWRPNPHWRRTRNQLARCSVGFAGKMTGNIGKGV
TQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRSMKIKLHKPLLISSFTTLDGRGA
SVHLSGPACLIVYKATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGKVDGDAIRLVTAK
KVWIDHNTLYDCEDGLLDVTRGTTDVTVSNNWFRNQDKVMLLGHEDGYVRDKDMKVTVVF
NHFGPNCNQRMPRIRYGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVAPKSGRKEVL
EKHGLITAQIKGSQSQTLKPLKNSQVQLEPYSAPGTPSVRTTTLNMTF |
NT seq |
1047 nt +upstreamnt +downstreamnt
atggcgttggttcaactcttgatcgttttgtttgtcgcaaatgtattggaggccacgaaa
cttaatgtgatggacaaatgttggcgaccaaacccacattggcgtagaacacgtaatcag
cttgcccggtgttcagtcggatttgccggaaaaatgacaggaaatatcggtaaaggagtc
acacaatacaaagtaaccgacccttctgatgatcctctgaacccaaaacctggaacccta
agatacggagcaacactcgttaaaggtaaaaaatggatcacattcaagagaagcatgaag
atcaagcttcataaaccgcttctaatcagcagcttcacgacactcgatggccgaggtgct
agtgttcacctctcgggtccggcttgtctcatagtctacaaagcaacagatgtgatcatt
catggacttaagatccatgattgtaaagctcatccaccaagctcagtgatgggaccagac
tcaaagatcattcaacttggaaaagttgacggcgacgcgattaggctggtcacggctaag
aaagtatggatcgaccacaacacgctctatgattgtgaagacggtcttctagacgtcaca
cgagggactactgatgtcacagtgtcgaacaattggtttaggaaccaagacaaggtcatg
cttcttggacatgaggatggctatgtaagagacaaagacatgaaagtcactgttgtgttt
aaccactttggtcctaattgcaaccagagaatgccaagaattagatatggatatgctcat
gttgctaataactattaccaaggatggactcaatatgcaattggaggaagcatgagccct
cgtgtgaagagtgagtcaaactacttcgtcgcgccaaaatctggacgcaaagaggtgttg
gaaaagcacggcctaattacggcccagatcaaaggttcacagtcgcaaacgctaaaaccg
ttaaagaactcacaagttcagctggagccttacagtgcaccaggaactccatctgttaga
acaacaacgcttaacatgactttttag |