Camelina sativa (false flax): 104772179
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Entry
104772179 CDS
T05044
Name
(RefSeq) SNW/SKI-interacting protein-like
KO
K06063
SNW domain-containing protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104772179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104772179
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104772179
Complex C
104772179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Drf_GBD
Motif
Other DBs
NCBI-GeneID:
104772179
NCBI-ProteinID:
XP_010495124
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All DBs
Position
20:3994996..3997550
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AA seq
670 aa
AA seq
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MTTSLLQVLLPPVKSTATAFYDHSNDPWFKYRSMESEAKRFSGAIVKPVPAYMNRQGFRP
DHQGFGDGGAFPEIHVSQYPLGMGKNRSNKTLPVTLDAQGNVVFDAVVRQQSEISKKIVY
SRPYDVIPKILKNEEDLLVDDEELKKQIHETAEETKAAIEKIVNARLRTSQPSNVTKASS
DSAYIKYKPSQQSAAFNSGARERIVRMVEMPVDPLDLPKFKHKRVPKASGSPPVPVLHSP
PRPVTIKDRQDWNIPPCISNWKNQKGYTIPLEKRLAADGRGLEEAQVSDDFAKLTEALYV
AEQKAREAVSVRAKVQKEMVMKEKERKEQELRDLAQKARRERAEAAVTISSESVERPGGD
CETERKQRDKIREERRKERERERRLETAGGKKSKITRDSERDITEKVALGMATVGGRGVE
VMYDQRLFNQDKGMDSGFAIDDQYNVYDKTLFTAKPTLSTLYKPKKDVDDEMYHEQLQKK
PMNTDKFKPDKAFTGAGKRERPLEFDKEAEEDPFGLAQWACNLKKGKKHLGSGSGTMRAS
GGGCSSSEEDYYGGSARTKINFERFPRQGLASVFEVLAGLVSAIVDSISRPSLWGIPVDL
ASMLPFSDAYFPFQCQFLRILAGPLTFKSLLMLAHTVSKPSAVPGQQGQDAYCKPTPIKF
QALDDKTEWW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtctcttcttcaagtccttttacctccggtgaaatcaaccgctacggcgttt
tacgatcattcaaacgatccgtggttcaagtaccgttccatggaatctgaggcgaaaaga
ttctctggtgccatcgtaaaaccagtacctgcttacatgaatcggcaaggttttcgtccc
gatcatcagggttttggagatggtggtgcattccctgagattcatgtctctcagtaccct
cttggcatgggtaagaatagatccaacaagactctgcctgttaccctggatgctcaggga
aacgtggtcttcgacgcggttgtgaggcagcagagtgagatttctaaaaagattgtttac
tctcgaccttacgatgttattcccaagattctgaaaaacgaagaagacctgttggttgat
gatgaggaactgaagaagcagatacatgagactgctgaagaaacaaaagctgccattgag
aagattgtgaatgcgaggctgagaacatcacaacctagtaatgtaaccaaggcatcgagt
gactcagcgtacatcaagtataagccatcccaacaatctgcagcgttcaactccggtgct
agagagaggatcgtgaggatggtggagatgcctgtagatccccttgatttaccaaagttc
aagcacaagcgagttcccaaagcttctggttctccgcctgttccagtcctgcattcacct
ccgaggcccgttactatcaaggacagacaagactggaacatccctccttgcatctccaac
tggaaaaaccagaaaggttatacaatcccccttgaaaaacgccttgccgctgatggaagg
ggcctggaagaggctcaggtaagtgatgactttgccaagttgacagaggcgctctatgta
gctgagcagaaagctagggaggctgtttcagtgcgggccaaggttcagaaggagatggtg
atgaaggagaaggaaagaaaagagcaggagctgagggatcttgcccaaaaggctcggcgc
gagagggctgaggctgcagtaacaatatctagcgagagtgttgaacgaccaggaggcgat
tgtgagacggaaagaaaacagagggataagattcgagaagagcgtcgtaaggaaagagag
agggagagaaggttggaaaccgcggggggtaagaagagcaagatcacaagggacagtgag
cgtgatatcactgagaaggttgcgcttggaatggcaactgttggaggcagaggtgttgaa
gtcatgtacgatcaacggctgtttaaccaagacaagggcatggactcgggttttgccatt
gatgaccaatacaacgtatatgacaaaacattattcacggcgaagcccactctctcgacg
ctgtacaagccaaagaaggatgtggatgatgaaatgtatcacgagcagctccagaagaag
cccatgaacactgacaagttcaaaccagacaaagcattcaccggtgcggggaagagagaa
cgacctcttgagtttgacaaggaagctgaggaagatcctttcggtcttgcacagtgggcg
tgtaatctgaagaaaggtaagaaacatttagggtctggatcaggaactatgagagcaagt
ggtggtggatgtagctcttcggaggaggattactatggtggttctgctcggaccaagatc
aatttcgaacgttttcctaggcagggacttgcttctgtctttgaagtacttgctggtttg
gtctctgcaatagtggacagtatttcaagaccgtcgttgtggggtataccggtggactta
gcttccatgttgccattctctgatgcatacttccctttccagtgtcaatttctgagaatc
ttggctggtcctctcacctttaagtctctcctaatgttagctcataccgtcagtaaacca
tctgctgttcctgggcaacaaggacaggatgcttattgtaagcctactccgataaaattt
caagcattagatgacaaaacagaatggtggtaa
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