Camelina sativa (false flax): 104772268
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Entry
104772268 CDS
T05044
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104772268
04120 Ubiquitin mediated proteolysis
104772268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104772268
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104772268
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104772268
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
104772268
NCBI-ProteinID:
XP_010495204
UniProt:
A0ABM0Y483
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Position
20:complement(6992586..6997698)
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AA seq
999 aa
AA seq
DB search
MTAAEVLSEGKELLLSRDLMERVLIDRLSGDFSSAEPPFPYLLGCYRRAHDESKKIQSMK
DKSLRSEMEIVTKQAKKLAVSYCRIHLANPDMFGNADTPSSGGLDTRLKKKNKSPLLPLI
FAEVGSGSLDMFGSSSSGVQAPPGFLDEFFKDSDFDSLDPILKELYEDLRSTVINVSVLG
DFQPPLSALKYLVSLPVGAKSLVSHEWWVPRGAYMNGRAMELTSILGPFFHISALPDNTL
FKSQPDVGQQCFSEASERRPADLLSSFSTIKKFMNILYSELHDVLMILLKSTDTRECVLQ
FLAEVINANASRGHIQVDPVSCASSGMFVNLSAVMLRLCEPFLDPHLTKRDKIDPKYAFC
GHRLKLSDLTALHASSEEVSEWVDKDATTNANGAGQENGNKSRLLQSKEATSSSSNASGK
NAKPATKYTFICECFFMTARVLSLGLLKALSDFKHLSQDISRGEDNLAQLKAMRDQAPSP
QLELDISRMEKELELYSQEKLCHEAQILRDGDFIQRALSFYRLVVVWLVGLAGGFKMPLP
STCPMEFSCMPEHFVEDAMELLIFASRIPKALDGVPLDDFMNFIIMFMASPEYVRNPYLR
AKMVEVLNCWMPRSSGSSSATSSLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFN
IRHNIAELLEYLWQVPSHRNAWRRIAKDEEKGVYLNFLNFLVNDSIYLLDESLNKILEIK
QIEAEMSNTAEWEQRPTQERQERTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFL
LPEMVERVANMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKQLLKQIVRIYVNLARGDSEN
IFPGAISSDGRSYNEQLFNAGADVLRRIGEEGRIIQEFMELGTKAKAAASEALDAEAALG
EIPDEFLDPIQYTLMRDPVILPSSRITVDRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIE
LKTKIDEFVKSHQSKKRTSGEDSSNKERIQTTSSNMLID
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgctgaggttctcagcgaaggcaaagagcttttgctttctcgtgatctgatg
gagagagtgttaatcgatcgtctctccggcgacttctcatccgcggagccgcctttccct
tacctactcggctgctaccgtcgtgctcacgacgaatcgaagaaaatccagtctatgaag
gacaagagtcttagatcggagatggagattgtcactaaacaggccaagaagctcgctgtt
tcttactgtaggattcacttggccaatcctgacatgtttggcaacgcggatacacctagc
agcggtggacttgatactaggctgaagaagaagaacaagtctcctttgctgccgttgatt
ttcgccgaggttggttctggttcgttggatatgtttggaagtagtagcagtggggttcag
gctcctccggggtttttggatgagtttttcaaagactcggattttgatagcttggaccca
attttaaaggagctttacgaggatttgaggtctacggttattaatgtatcagtgcttgga
gatttccagccaccattgagtgcactcaagtatcttgttagcttaccagtaggagctaaa
tctcttgttagtcatgagtggtgggttccacgtggcgcctatatgaacggtagagccatg
gagttgacaagcattctcggccctttcttccatattagtgcactgcctgataatacgctt
ttcaagagtcaacctgatgttgggcagcagtgtttctctgaagcatcggaacgtcgtccc
gcagatttattatcatccttctccacaattaaaaagtttatgaacatattgtacagcgag
ttgcatgatgtactgatgattttacttaaaagtaccgatacccgtgagtgtgttctacag
tttcttgcagaggtgatcaatgcaaatgcatctagaggccatatacaggttgatccagtc
tcttgtgctagctcaggcatgtttgttaacctcagtgcagttatgctccggctctgtgaa
ccatttttagacccgcatttaactaaaagggataagattgatccaaaatatgctttctgt
ggccatcgcttaaaattaagcgacttgactgctctccatgcatcatccgaagaagtttct
gagtgggttgacaaagatgctacgacaaacgcaaatggtgctgggcaagaaaacgggaac
aaaagtcgcttgttacaatccaaagaagccacaagttctagtagtaatgcttctgggaaa
aatgcaaagccagcaactaaatacactttcatttgtgaatgcttctttatgactgcaagg
gtccttagtttgggtctcctaaaagcactctctgactttaaacatctttctcaggacatc
tcgagaggtgaagataatcttgcacaactaaaagccatgagagatcaagcaccttctcca
cagttggaacttgatatatcccgaatggaaaaagaactagagctgtattctcaggaaaaa
ctttgccatgaggcccaaatattgagggatggcgattttattcagcgagctctgtctttc
tatcgcctagtggttgtttggttagttggactagctggtggctttaagatgcctttaccg
tcaacttgtcccatggaattctcctgtatgcctgagcattttgttgaagacgcaatggag
ttactgatatttgcttcaagaattcccaaagctttggatggtgtaccactggacgacttt
atgaacttcataattatgttcatggcaagtcctgaatatgttagaaacccgtatctcaga
gcaaaaatggttgaagttctgaactgctggatgcctcgttcaagtggttcttcatctgcc
acatcttctctttttgaggggcatcagttatcgctcgagtatcttgtcaggaatttactg
aaactatatgtggacattgagttcacgggttcacacactcagttctatgacaagttcaat
attcgccacaacattgccgagcttttggagtatctctggcaggtgcctagtcaccggaat
gcttggagacggattgcaaaagatgaagagaagggcgtgtacttgaacttcttaaacttc
ttagtcaatgatagcatctatcttctagatgagagtctgaacaaaattctcgagattaaa
caaatcgaggcagagatgtcgaacactgcagaatgggagcagagaccaactcaagagagg
caggagagaacaagacttttccattctcaggagaatattgttagaatcgacatgaagctg
gcaaatgaagatgtgactatgcttgcatttacatctgaggagatcactgccccgtttcta
ctccctgagatggttgagagagttgcgaatatgcttaattacttcttgctacaactcgtg
ggtccacagcgtaaatcattaagcttgaaagatcccgagaagtatgagttccgtccaaaa
cagttgcttaaacagattgttcgcatatatgttaatctcgctagaggagactcagaaaac
atattccctggtgccatatccagtgatggccgatcatataacgaacagttattcaacgca
ggagcagatgtgcttaggagaataggcgaagaaggaagaatcattcaagagtttatggag
ttaggcacaaaagccaaagctgctgcttctgaagctctggatgctgaagctgcacttggc
gaaatacctgacgagttccttgacccaattcagtacacactaatgagagatccagtgata
cttccaagctcaagaatcacagttgatcgacccatcatccaacgtcatcttctcagcgac
aatcatgatccatttaaccgagcacatttgacatcggatatgttgataccggacatcgag
ttgaagacgaaaatcgatgagtttgttaagtcgcatcagtctaagaaacggacaagtgga
gaagatagcagcaacaaggagaggatacagacgacaagcagtaatatgttaattgattaa
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