Camelina sativa (false flax): 104772314
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Entry
104772314 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104772314
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104772314
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
104772314
NCBI-ProteinID:
XP_010495247
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Position
20:complement(8272132..8274020)
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AA seq
425 aa
AA seq
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MKSLLSLVFLCLFRINKLGFCLAEEARKANNGVGSPGFTSVTSFGAIGDGKTDDTKAFLK
AWEAVCKGGSRGNTKILVPQWKTFMLKPLAFVGPCTSSSISFMIKGNLVAPSYTWYAGRY
PTWIHFDSINGLVVTGGGTIDGRGSLWWGHVNNRPSAMKFNNCNGLRISNLRHLNSPRSH
VGLSCSKNIEVSDLNMTAPGDSPNTDGIDISNCKKVNIHDSVIATGDDCIAINSGSSDIN
ITGIFCGPGHGISVGSLGVNGDFATVEEVRVKNCTFTHTQNGVRIKTYQNGSGYARKISF
MDINMVASENPIIIDQSYHNGGTNGGKGKSSNRYQNCHLAKPKSQTGNGKGVKVSDVRYT
RIHGSSASDQAITLNCDADLGCVGIVMDNVNMNSATTGHKVFASCKNAHGSFYDSKVTCL
KKYYL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctttgttgtccttggtctttttatgtttgtttcgaataaacaaattaggtttt
tgcttagcagaagaagctcgaaaggctaacaacggagttggaagccctggattcacaagt
gtcactagtttcggagctattggcgatggaaagaccgatgatactaaggcttttcttaag
gcatgggaagctgtatgtaaaggaggaagtagaggcaatacaaagattctagtgcctcaa
tggaaaacattcatgcttaagcctcttgcattcgtcggtccatgcacctcttcctctatc
tcctttatgataaaaggtaatcttgtggcaccgagttacacttggtatgcgggaagatac
ccaacatggattcattttgacagtatcaacggcctagttgtcaccggaggtggcaccatc
gatggtcgtggttctttgtggtggggccacgttaataaccgcccctctgcaatgaagttc
aacaactgtaatggtcttaggatttctaatctccggcacttgaacagccctcggagtcat
gtaggactaagttgttcaaagaacatcgaggtctcggatctaaatatgactgcacccggc
gatagtcccaacaccgatggtattgacatatcaaactgtaaaaaagttaacatacacgac
tcagtgattgccactggagatgactgcattgccattaatagtggttcctctgatatcaac
ataaccggcattttctgtggccccggtcatggcatcagtgtaggaagccttggagtaaat
ggagattttgcaaccgttgaagaagtgagggtaaaaaactgcacttttacacacactcag
aatggtgtccgaatcaagacataccagaacggatcaggatatgctaggaaaatctcattc
atggatattaacatggttgcatccgaaaaccctattatcatcgaccagagctatcacaat
gggggaacaaatggaggaaagggcaagtcatctaatagatatcaaaattgtcatttggca
aaaccaaaatctcagaccggtaatggcaaaggagtgaaagtgagcgatgtgcgttacact
agaatacacgggtcatcagcgagcgatcaagctatcacattgaactgcgatgcagacttg
ggatgtgttggtattgtgatggacaatgtgaatatgaactcagcgacaacaggtcacaag
gtgtttgcttcatgcaaaaatgctcatgggtctttttatgattcgaaagtaacatgtctt
aaaaagtactatctatga
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