Camelina sativa (false flax): 104772696
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Entry
104772696 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 5-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104772696
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104772696
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104772696
03019 Messenger RNA biogenesis [BR:
csat03019
]
104772696
03041 Spliceosome [BR:
csat03041
]
104772696
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104772696
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
104772696
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104772696
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104772696
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104772696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Motif
Other DBs
NCBI-GeneID:
104772696
NCBI-ProteinID:
XP_010495583
LinkDB
All DBs
Position
20:complement(20264216..20266954)
Genome browser
AA seq
205 aa
AA seq
DB search
MAKEYDYGVYLSSNVAGEIEGENVVSAVAVSSEPRSCIANNKSVNSSNSRRGTNRRSDIH
GQYSDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETIFLLLAYKIKYPENFFLLRGNHE
CASINRIYGFYDECKRRFNMKLWKLFTYTFNCLPVAAVIDEKILCMHGGLSPDLTNVEQI
KNIERPSDIPDSGLLCDLLWSWDLR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagagtatgattatggagtctatctttcatccaatgttgcaggcgagattgag
ggtgaaaatgttgtgtcggcagtggcagtttcttccgagcctcgttcttgtattgcaaat
aataagtccgttaattctagcaatagcagaaggggcactaatcgtagaagtgatattcac
ggtcagtactcagatttattgaggcttttcgagtatggaggtttccctcctgcagcaaac
tacttattcttaggagattacgttgaccgtgggaagcagagtctggagactatttttctt
ctgcttgcctacaagatcaaataccctgaaaacttttttcttctaagaggaaaccatgag
tgtgcttctattaacagaatctacggattctatgacgagtgtaaacgaagattcaacatg
aagctctggaaactatttacatacacttttaactgtctccctgtggcagctgtcatagac
gaaaagatactttgtatgcacggtggactgtctcccgatttgaccaatgtggaacagatt
aagaacatagagcgtccaagtgatattccagactctggtttgctttgtgaccttctttgg
tcttgggatctgagataa
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