Camelina sativa (false flax): 104772965
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Entry
104772965 CDS
T05044
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104772965
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104772965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
104772965
NCBI-ProteinID:
XP_010495820
LinkDB
All DBs
Position
20:29742995..29752309
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AA seq
1255 aa
AA seq
DB search
MASASQFLLEDQTDEDFFDKLVDDAFSPTQAQASSSASELKFDYGSDSDDTRAFSNLSIA
KDPVADGVDTLNEGASSSLGIDDDPSSTALEPVQFVNSDARDDEMRSEVAEIPLSDTSKE
SKLVNEPGIPPGVKELDWGSFDADLSVNDGRGFGSYSDFFTELDGTAGSLQGNAQVAVAT
GGNLDTMNTRDGLDNSPGSDQHQGQVHHDSASGQYVDNSQSWETLYPGWKYDESTGQWYQ
VDGHDASMNSQEGYENSTTSNWDNISANNLDIAYQRQSTTSAVAGTVENVSTWNQVSQVN
NGYPEHMVFDSQYPGWYYDTIAQEWRSLDSYNQAFQTTGQANDQHVQNGNSLAAMYHNRE
SNVHDVYDKKQTLRTQEFDIQSQHGNWDQSYYANNQQTTNTWQSENAGNAEAAVTSASLS
NFGGNQQVNNLYSTGSVAEQFKPNEIGVESFIPQHTNLASVTQNGPMSFSNDFYSRQNSV
NNASQSFQNNQLFSPSAGRSSDGRPPHALVNFGFGGKLIVMKDDSGSLQSSSFGSQNGTG
GSYISVLNLAEIITGSASYSSLGENSLSYFNCLDQQSIPGPLVGGNAGSKDLHKWLDEKI
LNCESSNMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGTDASQKETDSAEAAVAKLFANA
KKDGVQNGYGPISQCLQHLPPESQMQVIASEVQTLLASGRKMEALQCAQEGHLWGPALVI
AAQLGQQFYVDTVKQMALRQLVPGSPLRTLCLLVAGQPAEVFSTGSTSDLSFPGSINVPP
QQPQFGSTSMLDSWEENLGIITANRTTDDELVITHLGDCMWKERGEIIAAHICYLIADKN
FDPYSESARLCLVGADHWKYPRTYASPEAIQRTELYEYSKTLGNSQYTLIPFQPYKVIYA
HMLAEVGKLSTALKYCQSVIKCLKTGRSPEVEMWKQFVSSLEERIRIHQQCGYTENLAPA
KLVGKLLNFFDSRAHRAVGGMPPPAPHSTKGNLQGNEYQHQQQEATKLPYSQSVNTMSSL
MPPASMEPIHESGGNGRRMAVHTRSVSEPDFGRTPIQDMAGSSKEKAVDGVKKLKSSGTV
AGSRFSRMLETFGRVLARPSKEAKLGAENQFYYDDNLKRWVEKGVEPPAEEAALPPPPTI
GSFQNNSSGYENKSDMNPSNGNWSSGGPAPSDNSSGIPPISHGSNQFSARGRTGVRARYV
DTFNQGRGNSQTMFQSPSVQTAKPPIPAKAKFFVPAAPASFSNDQVMDAAAVEWI
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcttctcagttcctgctggaggatcaaacggatgaggatttcttcgacaag
cttgttgatgatgccttttctcccacccaagctcaggcttcatcctctgcctcagagctg
aaattcgactacggaagtgactccgatgacaccagagctttttctaatctctccattgcc
aaagatcctgtggctgatggagttgacacattgaatgagggcgcaagtagttccctggga
atagacgacgatccttcatccactgccctggaacctgttcaatttgtcaacagtgatgca
agagacgatgaaatgagatcagaggtagctgagattccactatctgatacatcaaaagaa
agcaagcttgttaatgagcccgggattcctcctggggttaaggagcttgattggggttcg
tttgatgcagatttatctgttaatgacggtcgtgggtttggttcatactctgatttcttc
actgagttggatggaactgctggaagtctacagggaaacgcacaagttgctgtggccacc
gggggaaacttggatacaatgaacacaagagatggtttagataattccccaggttctgac
caacatcagggtcaagtgcaccacgattctgcaagtgggcagtacgtggataatagtcaa
tcttgggaaactctctatcctggatggaaatatgatgaaagtactggccaatggtatcaa
gttgatggtcatgatgcaagcatgaattcacaggagggctatgaaaactcaacaacgagt
aactgggataacatttctgctaataacttggatattgcttatcagagacagagtacaaca
tccgcagtggctggcacagttgagaatgtgtctacctggaaccaggtttcacaagtgaac
aatgggtatccggaacacatggtctttgactcccaatatccgggatggtactatgacaca
attgctcaagaatggcgctctctggacagctacaaccaggcttttcaaactactggtcaa
gctaatgatcagcatgttcagaatggcaattctcttgcagctatgtaccataatagagag
agtaacgtacatgatgtttacgataaaaagcagacactcagaacgcaagaatttgatatc
cagagccaacatggaaattgggatcaatcgtactatgccaacaatcagcagactacaaac
acttggcaatcagaaaatgcaggtaacgctgaggcggctgtaacttctgcatcattatca
aacttcggagggaaccagcaagtaaataatttgtacagtacaggatctgtggctgaacag
ttcaagccaaatgagattggcgttgagagcttcatacctcagcatacgaatttggctagt
gtcacgcagaatggacctatgagtttctcgaatgatttctatagtagacagaattctgta
aataatgcttcacaatcattccagaacaatcagcttttctccccaagtgcaggaagatca
tctgatgggcgtccaccacatgcacttgtcaattttggatttggaggaaagcttattgtt
atgaaggatgacagtggttctctccagagttcatcatttggaagtcagaatggaactgga
ggaagctatatctctgtcttaaacttggcagaaattattactgggagtgcctcttattca
agtctcggggaaaactctttgagctacttcaattgtctggatcaacaatctattccaggt
cccttggtaggaggaaatgctggaagtaaagacttacataagtggcttgatgagaaaatt
ttgaattgtgaatcttccaacatggatttttcaagagggaaacttttaaagatgctcctt
tctttgctaagaatatcttgtcagtattatgggaaactccggtctccttttggtactgat
gcatcgcaaaaggaaacggactctgctgaagctgccgtagctaaactttttgcaaatgcc
aagaaagatggtgtacaaaatggttatggtcctattagccaatgcttacagcatttacca
cctgaatcacaaatgcaagtaattgcttcagaggttcagactcttctggcttctggtagg
aagatggaggctctccagtgtgcacaagaaggtcatttatggggaccagcacttgttatc
gcggcacaacttgggcaacagttctatgttgacactgtgaaacaaatggcccttcgtcag
ctggttcccgggtcacctttacgaacattatgcctgctggttgcagggcaaccagctgaa
gttttctcaactggaagtacaagtgatctctcttttcctggttccataaatgtgcctcca
cagcaacctcagtttggaagtactagcatgcttgacagttgggaagagaacttgggtata
ataactgctaacagaacaacagatgatgagcttgtcattactcatcttggagattgcatg
tggaaagaaaggggcgagataattgcggcgcatatttgttatttaattgcggataagaac
tttgatccatactcagaaagcgccagactctgcctggttggagcggatcactggaaatat
cctcgaacatatgcaagtccagaggctatacagagaacagagttatatgaatactctaag
acgctgggaaactctcagtataccctgataccgtttcagccatataaagtcatatatgcc
catatgctggctgaagttggtaaactctcgactgcactgaaatactgtcaatcagtaata
aaatgcctcaagactgggcgatcacctgaagtggaaatgtggaaacagtttgtttcatct
cttgaagagagaatccgtattcaccaacagtgcgggtatacagagaatttggccccggca
aaacttgttggaaaactgctgaacttttttgatagtagagcacatcgtgctgttgggggt
atgccaccacctgcaccacattcaaccaaaggaaacctacagggaaatgagtatcaacat
caacagcaggaagccactaagttaccatatagtcaatcagttaatacaatgtcatcactg
atgccccctgcttcaatggaacccatacatgagtcgggtgggaatggaaggagaatggca
gtacatactagaagtgtatcagagccagattttggtagaacgccaatacaggatatggct
ggctcctcgaaagaaaaggcagttgacggggtgaaaaagttgaaatcctctgggactgtg
gcaggttcgcggtttagtcgtatgctggaaacttttgggagggtcttagctcggccatct
aaagaggcaaaattgggggcagaaaatcaattctactatgacgataatctaaagagatgg
gtggaaaaaggtgtggaacccccagctgaggaagctgcactgcctcctcctcctacaata
ggctcattccaaaacaactcatcgggttatgaaaacaaatctgacatgaatccatctaat
gggaactggagctctggcggcccagctccatcagataattcttcgggaatcccaccaatc
tcacacggttcgaatcaattctcagctcgtgggcgtacgggtgtgcgagcaagatatgtt
gacaccttcaatcaaggccgtggaaactctcagaccatgtttcagtcaccttccgtacaa
actgcaaaaccaccaatccccgcaaaagcaaaattctttgttccagcagcacctgcatcg
ttttcaaacgaccaggtgatggacgcggctgctgttgaatggatatag
DBGET
integrated database retrieval system
