Camelina sativa (false flax): 104773181
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Entry
104773181 CDS
T05044
Name
(RefSeq) probable pectate lyase 3
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104773181
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104773181
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104773181
NCBI-ProteinID:
XP_010496063
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Position
3:complement(6541284..6543125)
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AA seq
455 aa
AA seq
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MAAAFLTLGGFFLSLLAIVAPQVGAHVAVFDSYWMQRKSDALKQTFGSYDPNPLNVTNHF
NYHVNLAVDATESINDTRRELTQVRSRRKLQKHGGKCVAYNPIDKCWRCDRNWANNRKKL
ADCALGFGRKTTGGKDGPIYVVTDASDNDLINPKPGTLRYAVTRDGPLWIIFARSMIIKL
QQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVTGNGGLIRDSEQHI
GLRTKSDGDGISLFGATNIWIDHVSMTRCEDGMIDAIDGSTAVTISNSHFTDHQEVMLFG
ARDEHVIDKKMQITVAFNHFGKRLEQRMPRCRFGTIHVVNNDYTHWEMYAIGGNMDPTII
SQGNRFIAPPNEQAKQITKREYTPFVEWKSWNWQSEGDYFLNGAYFVQSGKANAWSAKLH
NPIPNKFAIRPKPGMMVRKLTMEAGVLGCKHGKAC
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgtttttgactcttggcggcttctttttatcgttattagctatagtggct
ccacaggttggagcgcatgtggctgtctttgatagctactggatgcaacgtaaaagcgat
gcattgaaacaaacatttggctcttacgatcctaatccacttaacgtcaccaaccacttt
aattaccatgtcaatttagctgtggatgccacggaatcaataaacgatacaaggagagag
cttacacaggtcagaagtcgtcgaaaattgcaaaaacacggcggaaaatgcgtagcttat
aaccccatagacaaatgctggcgatgcgaccgtaactgggcaaataaccggaagaaacta
gcggattgtgctctcggattcggccggaaaaccaccggaggaaaagacggaccgatctac
gttgtcaccgacgcgtctgacaacgatcttatcaaccctaaaccaggaacgttaaggtat
gcagtaactagagacggacccctttggatcatatttgcaagaagcatgatcataaaactg
caacaagaattgatgataacgagcgacaaaacaatcgatggaagaggagcgagggtttac
atcatggaaggggctggactaacgctgcaatttgtgaataatgtgatcatacacaatatt
tacgtcaagcacatcgttactggtaacggtgggttgatcagagactcagagcagcacata
gggcttaggacaaaaagtgatggtgatggaatcagcttgtttggagcaacgaatatttgg
atcgatcatgtctcaatgacaagatgtgaagatggtatgatcgatgcaattgacggctcc
accgccgtaactatctccaatagtcatttcaccgaccaccaagaggtgatgctgtttggg
gcgagggacgaacacgtgatagacaagaaaatgcagataacggttgcgtttaaccacttc
ggtaagagattggaacagagaatgcctcgttgcagattcggaacgatccatgtggtgaac
aatgactacacacattgggaaatgtatgcaattggtggaaacatggaccctacaatcatt
agtcaaggaaaccgtttcattgctcctcctaacgaacaagccaaacagataacaaagaga
gagtacacgccattcgttgaatggaagtcatggaactggcaatcagaaggagattacttc
ctcaacggagcttactttgtgcagtcaggaaaagcaaatgcgtggagcgctaaactgcat
aacccgattccaaacaagtttgcaattcgacctaaaccgggaatgatggtccggaaactc
accatggaagcaggagtgcttggttgcaaacacggtaaagcatgctga
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