Camelina sativa (false flax): 104773335
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Entry
104773335 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104773335
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104773335
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104773335
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
REP_ORF2-G2P
Ig_DR_A0283-like
Pam16
Motif
Other DBs
NCBI-GeneID:
104773335
NCBI-ProteinID:
XP_010496219
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MSLKKKKKITSLIICFLLLLLLPIVFSKPTRNLDGTGTARAPTVQQIRNKHGTREVIVDN
GIIRVSFSSPQGLITGIKYKGIDNVLSPHQRARGYWDITWQGGLDQVEGTKFRIITQNQE
QVEISFSRTWESGSRSRSHHHIPLNVDKRYIIRKNTSGIYAYGIFERLPEWPEFDMGQVR
IVFKLDQDKFHYMVVADDIQREMPTDGDRDIHRGHAKALGYKEAVQLIHPHNPMFKNQVD
DKYQYSCEIKDNKVHGWISTKSHVGFWIISPSGEYRSSGPVKQELTSHTGPTAIASFISG
HYLGTDMDVHYGEAWKKVLGPVFIYLNSGDDLLWEDAKRQSKEEVKAWPYDFVASSDFPS
RRERGTVTGRLLVNDGLLTPGRFAYVGLAPPGEAGSWQTNTKGYQFWTKTNETGYFKISN
VRPGTYNLYGWVPGFIGEFRYKNRVNVASGSEIRLGKVVYKPPRNGPTLWEIGVPDRTTR
EYFVPEPYKNTINPLYLNHTDKFRQYGLWQQYTELYPNHDLVYTIGASNYSQDWFYAHVT
RNNGDSTYKPTTWQIVFHLPYVNMRGSYTLQLALASASRANLQVRFNNQYTMPLFSTGYI
GRDNAIARHGIHGIYRLYSINVPGRLLRTGTNTIYLRQAKASGPFEGLMYDYIRLEEPSR
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaagaagaagaagaagattacttctttaattatctgtttccttctgttgctt
cttcttccaatcgtcttttctaagccgacaagaaacttagacggaacaggtactgcaaga
gctccaacagtgcaacaaataagaaacaagcatggaactagagaggtgatagtggataat
gggatcatcagagtcagtttctcgagtcctcaagggcttataactggcatcaaatacaaa
ggaatcgataatgttctcagtccacatcaacgagctcgagggtactgggacataacatgg
caaggagggttagatcaagtcgaaggaactaaattcagaatcataactcaaaaccaagaa
caagtagagatctcgttctctagaacatgggagagtggttctcgttctcgttctcatcat
catattccattaaacgtagacaagaggtatattatacgtaaaaatacttcaggaatctac
gcatacggaatcttcgagagacttcccgaatggccagaatttgatatgggtcaagttcga
atagtcttcaaactcgaccaagataagtttcattacatggtggtcgcggatgatatacaa
agagagatgccaacggacggtgaccgcgatatccatcgtggtcatgctaaggctcttggt
tataaagaggccgtgcaactgattcatcctcataaccccatgtttaaaaaccaagttgat
gataagtaccaatactcatgtgagatcaaagacaacaaggtgcatggttggatctcaact
aaatcccacgttggcttttggattatctcacctagtggcgaataccgctctagtggaccg
gtcaaacaggagctcacatcccacaccggtccaacggccatcgcgagctttataagcggg
cattatcttggtacggacatggatgtgcattatggtgaagcgtggaaaaaagtcttagga
cctgtttttatctacttgaactccggagatgatttgctatgggaagatgctaaacgacag
tctaaagaagaagttaaagcctggccatacgattttgtagcatcctctgacttcccttct
cgtcgagaaagaggaaccgttactggtcgtcttctagtcaacgacggactcttgacgccg
ggaagatttgcatatgtcggtttagcaccaccgggagaagctggttcgtggcagacgaat
actaaaggttatcagttttggacaaagactaacgagaccggttatttcaagatatctaac
gttagaccaggaacttacaatctgtatggatgggttcctggttttatcggagagtttaga
tacaaaaaccgtgttaacgtagcttcaggttcagagattagactcggaaaagttgtctac
aagccccctaggaacggtccaacgctttgggagattggtgtacccgatagaaccacacgt
gaatactttgtcccggagccgtacaagaatacaataaaccctttatatctaaaccacacg
gacaagttcaggcagtacggattgtggcaacaatacacagagttatatccaaaccatgac
ctcgtctacacaattggagctagtaactatagccaagactggttctacgcacatgtcaca
agaaacaatggtgattccacgtacaaaccaacgacatggcagatcgtgtttcatcttcca
tacgtgaacatgagaggcagctacacattacagctagctttagcctcagcttcacgggct
aatctacaagtacggttcaataaccaatacactatgccattattctcaacgggctatatc
ggaagggataatgctatagcaagacatgggatccacggaatctaccggctttatagcatc
aatgtgcctggaaggttgctacgaacagggaccaacacgatttatcttcgacaagctaaa
gcatcaggaccgttcgaaggacttatgtatgattacattcgtctcgaagagccttctaga
gattaa
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