KEGG   Camelina sativa (false flax): 104773408
Entry
104773408         CDS       T05044                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104773408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104773408
Spliceosome [BR:csat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104773408
 Complex B
    104773408
 Complex C
   U2 SnRNP specific factors
    104773408
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin MBDa TM1266-like
Other DBs
NCBI-GeneID: 104773408
NCBI-ProteinID: XP_010496317
LinkDB
Position
3:6665693..6669430
AA seq 771 aa
MTKILPLEAPPVDGNLGPLPPSQLTEEEKETMQAEAEQNNSNRAPASVSTHTKTIGIIHP
PPDIKPIVEKTAQFVARYGLVFENKVKAEKADKTHFNFLKSDDPYHDFYRHKITEYSALK
QDGAQFTDFDDTTKDPELDAVVADDESVSCDAKPDLQARFRVPSSKPLEAPEPQKYTVRL
PEGITGEELDIIKLTAQFVARNGKSFLTGLTSREGNNLQFQFMKPTHSMFTFFTSLVDAY
SEVLLRPPKDLKEKMIKSVASLTTVLERCLNRLEWDRSQEQQSKKEEEEKEKERVQMAMI
DWHDFAVVELIDFADEEDEDLPPSMTLDEVIRRSKVSAMEKDEVVESGKEVEMEMDEDEV
QFVAEGMRAANLEENGCSVQIENVHGEEAPMRIVKNWKRPEDRMITERDPTKVVISPITG
EMIPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGT
TEEEVSNAVKAEIEQKKDEQPKQVIWDGHTGSIGRTANQALTQNANGEEQGDGVYVYTNN
FPGPAALPPPPNLALNLPRPPPTFQYPGPPRPLVVPMMQPMQPMHQQHQFSMPGPLGQPS
MMMNQPPQMQSVMHVPPPPGSQFPRMEIPRPYGQLPSHSMGVMQRPPLPGLLAPPPPLLE
EPEPKRQKFDESSLVPEDQFLAQHPGSATIRVSVPKRDDESKVIEISVQSLSENVGSLKV
KIAGEIDIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSARDRGGRKR
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgacgaagatacttccactagaggctcctcctgttgacggtaatctaggtccacttcct
ccgtcgcaactaacggaggaagagaaagagacgatgcaagcagaggcagagcaaaacaat
tcaaatcgagctcccgcgtctgtttctacacacacgaaaactatcgggatcattcatcca
cctccagacataaaaccaatcgtcgagaaaacggctcagtttgttgccagatacgggctg
gtgtttgaaaacaaggttaaagccgagaaggcggataaaactcatttcaactttctgaaa
agcgatgacccttatcatgacttttaccggcacaagatcaccgagtactctgctctgaaa
caagacggagctcagtttactgattttgatgatactactaaagatcctgaacttgatgct
gttgtagcagatgatgagtctgtatcatgtgatgcaaaacctgacctgcaggctcgattt
agggttccttctagtaagcctttagaagctcctgagcctcagaagtatacagttagactt
cctgaagggatcacgggtgaggagcttgatattattaagctcactgctcagttcgtggca
cggaacgggaagtcgtttttaacgggattgactagtagagagggcaacaatcttcagttt
cagtttatgaagccaacacatagcatgttcacttttttcacttctctggttgatgcgtat
tctgaagtattattaaggcctcctaaagatttgaaagaaaagatgataaagagtgttgct
agtttgactactgttcttgagcgttgcttgaatcgtcttgaatgggatcgttctcaggag
caacaaagtaagaaagaagaagaagagaaagagaaggagagagttcagatggctatgatc
gattggcatgattttgctgttgttgagttgatagattttgctgacgaggaagatgaagat
ttgccaccgtctatgacacttgacgaggttataaggaggagcaaagtatcagcgatggaa
aaagatgaagttgttgagtctggaaaggaggtagaaatggaaatggatgaagatgaagtt
cagtttgttgcagaaggaatgagagcagcgaacctggaagagaatggttgctctgtgcag
attgaaaatgtacacggtgaagaagcacctatgaggattgttaagaactggaagaggcca
gaagataggatgattacagagagagatccaactaaagttgttatatcaccaattactgga
gagatgattcccattaacgagatgtctgagcacatgcggatttctcttattgatcctaag
ttcaaagagcagaaggatcggatgtttgctaagattcgtgagaccactcttgcacaagat
gatgagattgctaaaaacattgtcgggttggcccgcctgcgtcctgatatctttgggaca
actgaagaagaagtctcgaatgctgtcaaagcagagattgagcagaagaaagatgagcaa
ccaaaacaagtaatatgggatggtcacacaggaagtatcggtcgcacagctaaccaagcc
ttgactcagaacgctaatggagaggagcaaggtgatggtgtttatgtatatactaataac
ttccctggtccagctgctcttcctcctccgcctaatcttgccttgaacctccctcgtcct
cctcctacttttcagtaccctggtccaccgaggccacttgttgttccaatgatgcagcca
atgcagccaatgcatcagcaacaccagttctcgatgcccgggccacttggacaaccttcg
atgatgatgaaccaaccaccacaaatgcagtctgttatgcatgtgccccctccaccggga
tctcagtttcctcgtatggaaattcctagaccttatggtcagctcccatcgcattcaatg
ggggtgatgcagcgaccacctctgcctgggttgcttgctcccccaccacctcttcttgag
gagcctgagccaaagagacaaaagtttgacgagtcatcccttgttccagaagaccagttt
cttgctcagcatccgggttcggctactatcagggtttctgtgccaaaaagggatgatgag
tccaaagtcattgagatctcagtgcagtcgttatccgaaaacgtggggagtttgaaggtg
aaaatagctggggagatagatattcctgcaaacaaacagaagttaagtggaaaagctggg
ttcttaaaagacaacatgtcgcttgcacattacaatgtcggagcaggagaaatcctaaca
ttgtctgcgagggatcgtggtgggagaaagagatag

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