Camelina sativa (false flax): 104773710
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Entry
104773710 CDS
T05044
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104773710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104773710
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104773710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
104773710
NCBI-ProteinID:
XP_010496658
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MVFSIWVLFVVDTDHALFSKSHFKSSIMLCFSFLLLLLLTEIICGSRSDPYRGNEMKRKH
YFDFNHPFNQCPFEVFCSGTWKAVEYLRIENGAMTMRLLENGQVLDDIRPFQRLRLRSRK
ATLVDCTSFLRPGLDVCVLYQKDVTVDEETTEPVWVDARILSIERKPHESECLCIFHVSV
YIDQGCIGSEKHRMNRASVLMGLNQISILQKLCKEQSLDRYYRWRNSEDCTSLVKTRLNL
GKFLPDVSWLLVTSVLKNIVFQIRTFHEKMVYQIVADECSSSSLSAMNITVEDGVFMSKV
VLFNPAEDTHQDTDVKQEIEEEVMELRRSKRRSGRPDRFADSESQPDSKDGWVRMMPYRY
STWTDLSDDDEDYDEEECDDDRDTDDDLYLPLSQLLGKKGSTKGLSKDKRREIVLIDKTE
MKKRKKTERIGRNRELSVIPFTPVFEPIPLEQFGFNANSLCGGSSGSHLMDEIDKYRSKA
AKYGKNKKFEMDEMESDLCWNGPLRNVVQKTNGQHSRIRSVSGNTGVSEEPQIYKKRTLS
AGAYNKLIDSYMSRIDSTIAAKNEATNVVEQLMGLKNAASSSMEAEKSSSEDDDEEETSE
NEMLWREMELCLASSYILDDNEVRVDNEAFHKALGGCEHDYELNEEIGMCCRLCGHVGTE
MKHVSAPFAHHKKWTTETKQVNEDDINTTKVNQDGAESHNYTIPVASSDMPSAKESDNVW
SLIPQLERKLHLHQKKAFEFLWRNLAGSVVPAMMDPSSEKIGGCVISHTPGAGKTFLIIA
FLASYLKIFPGKRPLVLAPKTTLYTWYKEFIKWEIPVPVHLLHGRRTYCVAKENTIQIEG
IPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDSKFAHRKYMAKVLRESPG
LLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEYFNTLCLARPKFVQEVL
VELDQKFQTNQTEQKAPHLIENRARKFFLDIIAKKIDTKVGDERLQGLNMLRNMTSGFID
NYEGSGSGSGSGDVLPGLQIYTLLMNSTDVQHRTLTKLQNIMSTYHGYPLELELLITLAA
IHPWLVKTTACCTKFLNPQELSEIEELKHDAKKGSKVMFVLNLVFRVVKREKILIFCHNI
APIRLFLELFENIFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAE
GISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWK
EWVSSMIFSEEFVADPSQWQAEKIEDDVLREIVEEDKVKSFHMIMKNEKASTGG
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggttttttcaatctgggttttgtttgttgttgatactgatcatgctttgttttccaaa
agccacttcaaaagctcgatcatgctttgtttttcctttttgctgttgttgttgttgacc
gagatcatatgtggctcaagaagtgatccttacaggggaaatgagatgaagagaaagcat
tactttgacttcaaccatccatttaatcaatgtcctttcgaggtgttctgctcggggaca
tggaaggccgtggagtacttaaggatcgagaatggagcgatgacgatgcgtctcttggag
aacggacaagtgttggatgatataagaccatttcagaggcttcgtcttagatcaagaaag
gccactttggtcgattgtacatcttttttaagacctggtctggatgtttgcgttctctat
cagaaagatgttactgtggatgaagagactacagagccggtttgggtggatgcaaggata
ttatctatagagaggaagcctcatgaatctgaatgcttgtgtatattccatgttagtgtg
tatatagaccaaggctgcatcggttcggagaaacatagaatgaatagagcttcggtactg
atggggcttaaccaaatctctatactccagaagctttgcaaggaacaaagcttggaccgc
tactacagatggagaaactctgaggactgtacttcgctggtgaagacaagactaaatctg
ggaaagttcttgcctgatgtttcttggttgcttgttacatcagttttgaaaaacattgtg
tttcagatcagaacctttcacgagaagatggtttatcagattgtggcggatgaatgctct
agtagctctttgagtgcaatgaacatcacggtggaagacggtgttttcatgtccaaagtt
gttttgttcaatccagctgaggatactcatcaagatactgatgtaaagcaggagatcgaa
gaggaggtaatggagctgcgtcgatccaagagaagaagtgggcggcctgatagattcgct
gactctgagagtcagccagattcaaaggatggatgggtaaggatgatgccatataggtac
agcacatggactgatttaagtgatgatgatgaagattatgacgaagaagaatgtgatgat
gatagagataccgatgacgatttatacttaccgttatcgcaattacttggaaaaaaggga
agcacaaagggattaagtaaggataagcgaagagagattgttttgatagacaaaacagag
atgaagaagaggaaaaaaacagagagaattggtagaaatcgcgagctttcggttattccc
ttcactcccgtctttgaacctataccgttggaacagtttggtttcaatgcaaatagtttg
tgtggtggttcctctggaagtcatttgatggatgagatagataagtatcgtagtaaagca
gcaaaatatgggaaaaataagaagtttgaaatggacgagatggaatctgatctatgttgg
aatggacccctcaggaatgtggttcaaaaaacaaatggacagcattcccgaatacggtct
gtttctgggaacaccggagtttccgaggaaccacagatttataagaagagaacattgagc
gcaggtgcgtataacaagctgatagactcgtacatgagtagaattgattctacaattgca
gccaagaacgaagcgaccaatgttgttgagcagttgatggggttaaagaacgctgcaagc
tcttccatggaagccgaaaaaagttcgagtgaggatgatgatgaggaagagacgtcagag
aacgagatgctatggagggaaatggaactatgcttggcttcttcttacattcttgatgac
aatgaggtgagagtggataacgaggcgttccataaagcactcggtggttgtgaacatgat
tatgaattgaatgaagaaatcggaatgtgttgcagattgtgtggtcatgtaggaactgag
atgaaacatgtttctgcaccttttgcgcatcacaagaaatggacgacagagactaagcaa
gtcaacgaagatgacataaatactacgaaagtgaaccaagatggagctgagagtcataat
tacactataccagttgcttcctcagatatgccctccgctaaagaaagtgacaatgtttgg
tctcttatacctcagcttgagagaaaactgcatttacaccagaaaaaagcttttgagttt
ctctggaggaacctagccgggtcagtggttcccgcgatgatggatccgagttcagagaag
ataggtgggtgcgtgatttctcatactcctggagcaggcaaaacatttctgatcatagct
tttcttgcaagttacttgaagatatttccgggtaaaaggccattggttcttgctccgaaa
acaaccttgtacacatggtacaaggagttcatcaaatgggagattccggtacccgttcac
ttgctccatggtcgtagaacctactgtgtggccaaagagaacaccattcagatcgaggga
attccaaaaccgagccaagatgttatgcatgttcttgactgtctcgacaaaatccagaaa
tggcatgcacagcctagtgttcttgtaatgggttacacatcgtttctaacattgatgagg
gaagattcaaagtttgctcatagaaaatacatggctaaagtactgagagagtctcctgga
ttactggttctagacgagggacataacccgaggagtaccaagtcgagattacgaaaggcc
ttgatgaaagttgatactgatctgaggattctgctttcgggcacattgtttcagaacaac
ttctgtgagtacttcaacactttgtgcttggctagacccaagtttgttcaagaggttcta
gttgagttggatcagaagttccagacaaaccaaactgagcaaaaggcgcctcacttgatt
gaaaatagagctcggaaattcttcctcgacattatagccaagaagattgacacaaaagtg
ggcgatgagcgcttgcaaggtctcaacatgttgaggaatatgaccagtggtttcatcgat
aactatgaagggagcggaagcggaagcggaagtggtgacgttctcccaggtttgcagatt
tacacattgttgatgaactccacagatgtacagcacagaactcttaccaaacttcagaac
ataatgtcgacttaccatggatatccactcgagctcgagttactcataacgttagcagct
atccatccttggttggtcaaaaccactgcctgttgcaccaaattcctcaatcctcaggag
ctttccgagattgaggagctcaagcacgatgcaaagaaaggatcaaaagtcatgttcgtg
cttaacctcgtgtttcgggtggtcaagagggagaaaatcctcatattttgccacaacatt
gcgccgattcgcctgtttcttgagctgtttgagaatattttcaggtggaagagaggccga
gagctcctgaccttgacaggggatcttgagctgttcgagagaggcagagtgatagacaaa
ttcgaagaaccaggaggccagtcacgtgttctgctcgcttcgatcacggcctgtgcagaa
ggcatcagtctaacagctgcatcacgggtgatcatgcttgattcagagtggaatccttct
aagacaaagcaagcaatcgcacgtgcattcagaccgggacagcagaaagtggtgtacgtt
taccagctcttgtccagaggaacacttgaggaagacaaatacaggaggacaacctggaaa
gagtgggtctcaagtatgattttcagcgaagaatttgtggcggatccatctcagtggcaa
gctgagaagattgaggacgatgttcttagagaaatcgtggaggaagacaaagtcaaatca
ttccatatgatcatgaagaatgaaaaagcttcaacaggtgggtaa
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