Camelina sativa (false flax): 104773979
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Entry
104773979 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104773979
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104773979
Membrane trafficking [BR:
csat04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104773979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps62
VPS13_M
VPS13_VAB
C2
Motif
Other DBs
NCBI-GeneID:
104773979
NCBI-ProteinID:
XP_010496953
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
NGSIGKPMIREGQGLDIFVRRSLRDVFKKVPTVSVEVKIDFLHAVISDKEYDIIVSCTTM
NLFEEPKLPPDFRGSSSGPKAKMRLLADKVNLNSQMIMSRTVTILAVDINYALLELRNSV
NEESPLAHVALEGLWVSYRMTSLSETDLYVSVPKVSVLDIRPNTKPEMRLMLGSSVDASK
QASSGSFPFSLNKGSFKRVNSRADLDFDAPCSTMLLMDYRWRASSQSCVLRVQQPRILAV
PDFLLAVGEFFVPALRAITGRDETLDPTNDPITRSRGIILSEPLYKQTEDVVYLSPCRQL
VADSLDIDEYTYDGCGKVVSLSEQGEKNLNIGRLEPIIIVGHGKKLRFINVKIKNGPLLS
KCIYLSNDSSCLFSPEDGVDISMLENASSNPENVLSHVHKSSDVSDACQYDSKSGQSYTF
EAQVVSPEFTFFDGTKSSLDDSTAVEKLLRVKLDFNFMYASKENDIWVRALLKNLVVETG
SGLIILDPVDISGGYTSVKEKTNMSLTSTDIYMHLSLSALSLLLNLQSQVTGALQSGNAI
PLASCTNFHRIWVSPKENGPRNNLTIWRPQAPSNYVILGDCVTSRAIPPTQAVMAVSNTY
GRVRKPIGFNCIGLFSVIQGLEGANVPHSRDSNECSLWMPVAPAGYTAMGCVANLGSEPP
ADHIVYCLRSDLVSSSSFSECIYTVPSSSLFESGLSMWRADNVLGSFYAHTSTAEPSRQY
SPGLSHCLLWNPLQSKTSPLSDQSSTSGSQSEQTSDQTGSSSGWDILRSISKATSYHVST
PNFERIWWDKGGDLRRPVSIWRPVPRPGFAILGDSITEGLEPPALGILFKADDSEIAAKP
VQFTKVAHIVGKGFDEVFCWFPVAPPGYVSLGCVLSKFDEAPRVDSFCCPRIDLVNQANI
YEASVTRSSSSKSSQCWSIWKVDNQACTFLARADLKRPPSRLAFAVGESVKPKTQDNVNA
EIKLRCFSMTLLDGLHGMMTPLFDTTVTNIKLATHGRPEAMNAVLISSIAASTFNPQLEA
WEPLIEPFDGIFKMETYDTALNQSSKPGKRLRIAATNILNINVSAANLETLGDAVVSWRR
QLELEERAAKMKEESAVSRESGVLSAFSALDEDDFQTIVVENKLGRDIYLKKLEENSDVV
VKLCHDENTSVWVPPPRFSNRLNVADSSREARNYMTVQILEAKGLHIIDDGNSHNFFCTL
RLVVDSQGAEPQKLFPQSARTKCVKPSTTIVNDLMECTSKWNELFIFEIPRKGLARLEVE
VTNLAAKAGKGEVVGSLSFPVGHGESTLRKIASVRMLHHSSDAENISSYTLQRKNAEDKH
DNGCLLISTSYFEKTTIPNTLRNIESKDFVDGDTGFWIGVRPDDSWHSVRSLLPLGIAPK
SLQNDFIAMEVSMRNGRKHATFRCLATVVNDSDVNLEISISSDQNVSSGASNHNALIAAR
SSYVLPWGCLSKDNEQCLHVRPTAENPHHSYAWGSCIAVSSGCGKDQPFVDQGFLTRQNT
VKQSSRASAFSLKLNQLEKKDMLFCCQPSTGSKPLWLSVGADASVLHTDLNTPVYDWKIS
ICSPLKLENRLPCPVKFTVWEKTKEGTYLERQHGVVSSRKSAHVYSADIQRPVYLTLAVH
GGWALEKDPIPILDLSSSDSVSSFWFVHQQSKRFVTLLTLFFFQLSYFEIVNPLCVLITP
NV
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
aatggttcaattggtaaaccaatgatacgtgaaggccagggactggacatctttgtccgg
cgcagcctaagagatgtttttaaaaaagtcccaacagtttcagttgaggttaagattgat
ttcttgcatgctgtgatatctgacaaagaatatgatattattgtaagttgcacaaccatg
aatttgtttgaggagccaaagctacctccagatttccgtggcagcagttctggtcccaaa
gctaaaatgcgtctactggctgacaaagttaacttgaatagtcagatgataatgtcacgt
acagttaccatactggctgttgatatcaattatgctcttctcgagttacgtaatagtgtt
aatgaagagtcaccattagctcatgttgcgcttgaaggattatgggtatcctacaggatg
acgtcactatctgagacagacttgtatgtgtcagttcctaaagtttctgttcttgatatc
cgtcctaacacgaagcctgaaatgcgattgatgctcggctcatcagtcgatgcttccaag
caagcttcctctggatcttttcccttttctctgaataagggaagctttaagcgagtcaac
tctagggctgatcttgattttgacgcaccatgttcaacaatgttgctgatggattataga
tggcgagcatcctctcagtcatgtgttttgcgggttcaacaacctcgtatcctagctgtt
cctgacttccttcttgcggttggtgaattttttgttccagctttgcgtgcaataacagga
agagacgaaacattagatccaacaaatgatccaatcacccgaagtcgtggcataattctc
tctgagcctctctataaacagacggaagatgttgtgtacttgtccccgtgtagacagtta
gtagcagactcattagacattgatgagtatacttatgacggatgcggaaaggtagtatct
ttgagtgagcaaggagagaagaatttaaacataggacgattagaacccatcataatcgtt
ggacatggaaagaagttgcggttcatcaatgtgaaaattaagaatggaccgcttctgagc
aagtgcatttacttgagtaacgatagtagctgtttattttctccggaagatggtgttgac
atctcaatgttagaaaacgcctcatcaaatcctgagaatgtgcttagccatgtgcacaaa
tcatcagatgtttcagacgcttgtcaatatgattcgaagtctggtcagagttataccttt
gaagctcaggttgtttctcctgagttcaccttctttgatggtacaaaatcatctctggat
gactccactgctgtagaaaagcttttgcgagtgaaattggattttaattttatgtatgcc
tcaaaagaaaatgacatctgggttcgagctttgctaaagaacctggtggttgaaactggt
tctggtcttatcattcttgatccagttgatatctccgggggatacacttctgtcaaagag
aaaacaaatatgtccttaacctccactgacatatacatgcacctttctttgagtgctctt
tctctcctactgaacctgcagagccaagtaactggggctttacaatctggaaatgctatt
cctttagcttcatgcaccaacttccacaggatttgggtttcaccgaaagaaaatggaccg
aggaacaacctcacaatttggagaccgcaggctccttcaaactatgtcatattgggagac
tgtgtgacgtcaagggcaattcctcctacacaagctgtaatggcagtaagtaatacatac
gggcgtgtgaggaagccaattgggtttaattgtattggcctgttctctgttattcaaggt
ttagaaggggctaatgttccacattcccgtgatagcaatgagtgttccctctggatgcct
gtagctcctgcaggatacactgctatgggttgtgttgcaaatttaggaagtgagccacca
gctgatcacattgtttattgtctgaggtctgaccttgtatcttccagcagtttctctgag
tgcatatacactgtgccctccagttcattatttgagtctggattgagcatgtggcgtgct
gataatgttcttggatcattctatgctcacacttcaactgcagaaccttctagacaatat
agccctggcctcagtcattgtcttctttggaatccccttcagtcgaagacatctccatta
tctgaccaatcatcgacaagtggatctcagagcgagcaaacaagcgaccagactggaagt
tcatcgggatgggacattctcaggtcaatttctaaggcaactagttatcatgtttcaacg
cctaactttgagagaatctggtgggacaagggtggtgatcttcgtagacctgtctcaata
tggaggcctgtaccacgtcctggatttgcaatattgggtgatagcataactgaaggattg
gagccacctgcacttggtatactcttcaaagcagatgactctgagattgctgcaaaacct
gtgcagttcactaaagtcgcacatattgtggggaaaggttttgatgaagttttttgctgg
tttcctgttgcacctcctggttatgtttctctaggatgtgttctctctaaatttgatgag
gccccacgtgtggattcgttttgttgtccacggattgatcttgttaaccaggccaacata
tatgaagcctctgtcacgagatcttcaagttcaaagtcttctcaatgctggagcatttgg
aaagttgacaatcaggcatgcacttttcttgcgcgtgctgatcttaaaaggcctccaagt
cggttggctttcgctgttggagaatcggtgaagccgaagacacaggataatgtaaatgcg
gaaattaagctgagatgcttctccatgacacttctagatggtttacatggaatgatgact
cctctctttgacacaactgtcaccaatatcaaactagcaactcatggtcgtcctgaggcc
atgaatgcagtactcatttcatcaatcgctgcttcaacatttaacccgcagttggaagcg
tgggagccgcttatagagccatttgatggaatattcaagatggaaacatatgatactgct
ttgaaccaatcatcaaagccaggaaaacgactgcgaattgctgctactaacattttgaac
ataaatgttagtgctgcaaaccttgaaactcttggcgatgctgttgtgtcttggagaagg
caattagaacttgaagaaagagcggccaaaatgaaagaagaatccgccgtctctcgtgag
agtggggttctttcagctttttcagctcttgacgaagatgattttcagaccattgtggta
gagaataaactcggccgtgacatatatctgaaaaagttggaggagaactcagatgtagtt
gtaaaattgtgtcacgacgaaaacacttctgtctgggttccaccgccaaggttctccaat
aggttaaatgttgcagacagttctagagaagcacgcaattacatgactgtacagattctt
gaggctaagggtttacatatcattgatgatggtaatagtcacaatttcttttgcacccta
cgcctcgttgttgatagtcagggtgcagaaccacaaaaactttttcctcaaagtgctagg
acaaagtgcgtgaagccttcaactacaattgtcaacgacttgatggagtgcacttccaag
tggaatgaactttttatttttgaaattcctaggaagggattggccaggttggaggttgag
gtaacaaaccttgctgcgaaagctggaaaaggggaggtcgtcgggtcgctttcgtttcct
gttggacatggggagagtacgcttagaaagatagcttcagtaaggatgctacatcattca
agtgatgcagagaatataagttcctatacccttcagagaaagaatgctgaagataaacat
gacaatgggtgcttgcttatctcaacatcttactttgagaagactacaatacccaacaca
ctaagaaatatagaaagtaaggattttgttgacggagacactggtttctggattggagtt
cgccctgatgactcatggcatagcgttcgctcgctgcttccgcttggtattgctccgaaa
tccctacaaaatgattttattgcaatggaggtttctatgagaaatggaagaaagcacgca
acattcagatgtttagctacagttgtaaatgattcagatgtcaatttagagatatccata
tcttctgatcagaatgtctcttcgggagcaagcaatcataatgcattgattgctgcaaga
tcttcatatgttttaccatggggatgtttatcaaaggataatgaacagtgcctgcatgtc
cgaccaacggctgagaaccctcatcattcttatgcatggggttcgtgcatcgcggtgagt
tctggttgtggaaaagatcaaccatttgttgatcaagggtttcttactcggcagaatact
gtcaagcaaagcagcagggcatctgcattttctttgaaattaaaccaacttgagaagaag
gatatgcttttctgctgccagccttctactgggagtaaaccattatggctcagtgtagga
gcagatgcgtcagttcttcatacagacctcaatacacctgtatatgattggaaaatttct
atatgttctcctttgaagctagaaaatagacttccttgtccagtcaaattcacagtgtgg
gaaaagacgaaagaaggcacatatcttgagagacaacatggtgtagtatcatcaaggaag
agtgcgcacgtatattcggcagatattcagagacctgtgtatcttacgttagctgtccat
ggtggttgggctttggaaaaggatcctattcctattttagatctatcttcaagtgacagc
gtgtcatccttttggttcgtccatcaacagagcaaaaggtttgtaactctattaactctt
ttcttttttcagctctcatattttgaaattgttaatcctttatgtgtacttattacccca
aatgtttga
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integrated database retrieval system
