Camelina sativa (false flax): 104774021
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Entry
104774021 CDS
T05044
Name
(RefSeq) protein TSS-like isoform X1
KO
K03255
protein TIF31
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csat03012
]
104774021
Translation factors [BR:
csat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104774021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
TPR_2
CLU_N
PAM2
TPR_8
CLU
TPR_9
TPR_1
Motif
Other DBs
NCBI-GeneID:
104774021
NCBI-ProteinID:
XP_010496994
UniProt:
A0ABM0Y822
LinkDB
All DBs
Position
3:complement(6958515..6968353)
Genome browser
AA seq
1582 aa
AA seq
DB search
MAPRSSKGKSNNRGKGGDKKKKEEKVLAPSLVEITVTTPYETKVILKGVSTDKIIDVRKL
LASHVKTCHFTNYSLSHKVKGQKLNDNIQVASLKPCFLRMIPEEYKEESQAWTQVRRVVD
IVACTTRFSSASPKSPNGKPVVVAGNNNASQVAASPEGLDMVSIHPTPKLSQFYDFFSIA
HLSPPILHLKKVDGSEEEEEEDGERRDGYHFGLKVKICNGKVIHVIASVNGFFAVGKQLS
HCHSIVDLLQNVSNAFAKAYESLMKAFTDRNKFGNLPYGLRINTWLVPPPVSESTSTFSP
LPTEDGQWGGNGGGQWMNGEYNLRPWAAEFSVLATLPCKTEEERVVRDKKAFLLHNQFLD
TSVQRAVRAICDVMDTNQHTTGLSSGSILLEDHVGDLFITVKRDIASLDPKPEATCQNEP
FVLSSKELAEKNLLKGITADESKIVHDTLALGTVIVRHCGYTAVVHVEGKTQKAMSDIRD
ILIDDLPDGGANALNLNSLRVQLHRAHSVGTSGENQPTQLDSDDIESYKCIAPKFVKVNL
TKLEEKWVSSVRPIRWELGSCWVQHLQKKETDVCGKPATNDETELSVKGLGKQFKVLKTK
SKKSENNRTVKEKEKDIRLHELNGEADLGKKSIDEHFETELKELLSEQAFSRLKETGTGL
HLKSKEELTKMVYGYYDEIALPRLVADFGSLELSPVDGRTMTDFMHIRGLQMRSLGHVAK
LAEKLPHIQSICIHEMITRAFKHLLRAVIASVNNMAKLPVAVAASLNFMLGRRESEGCDR
VPSEEYCLRLQWLQNFLSRKFGWIQTDEFNHLKKISILRGLCQKVGLELVPRDYDFDSPN
PFKSSDIFGLVPVCKHVLCISSDGRTLLESSKIALDKGKLDDAVNYGTKALVKMIAVCGP
YHRNTACAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYR
LQHFELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEKEVGNDNLALRYLHEALKCN
KRLLGADHIQTAASYHAIAVALSFMEAHSLSVQHEQTTLQILTAKLGPDDLRTQDAAAWL
EYFESRAIEQQEAARNGVPKPDASIASKGHLSVSDLVDYISSDPDTKGSVAHRKQRRARV
SQANDSVASADDATHKVAPQNGIAKRNDVIEANVIENRTEEKDPDAVVDEIKIGDIVVHR
LNVDSRIVEESTLDEGWQEAYSKGRSGNGARRKRQPDLMKKRMSFNRNLTGKQDVQQQNS
SSRLQKTTVRPSLSKPSSHRALKNTEKDVSKNTTKPQSKASGSAAATSITLASKSLSYKD
VAVAPPGTVLKPMLEKVELPLESTETQMYRISSSSAEAESKSDTVMLDLPIEGAELPCEK
QESQESGESVENLTSESEGDLGSCEGQKASDISRKKLSASAEPYNPGGFLVIDLQSLAAT
TGKYPILVADPISWAGVSCGIHSPPYYSVNHLNGVGMPRSMNPDAPEFVPRRSVQNSSQH
AGGDASVSVDPSSGLKAESGDPSRDSAVTEIVYSREEESGANANEINGDEGFVIVAKKRR
KNKFRLTNDAAGLYHQLPSVCA
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgaggtcgagcaaagggaaatcaaacaaccgagggaaaggaggagataagaag
aagaaagaagagaaagtgttggctccgagtctggttgagatcacagtcacaactccgtac
gagaccaaagtgatactcaagggagtctctactgacaaaatcattgatgtgagaaagctt
ttggcatctcacgttaagacttgccatttcaccaactattctctctcccataaggtgaaa
gggcaaaaattgaatgacaacatccaagttgcttccctcaagccttgtttcctccgcatg
attccagaggagtacaaagaggagagccaagcttggactcaggtgcggagagtcgtagac
atcgtagcgtgcaccacccggttctcctccgcttcccccaaatcccccaatgggaaaccc
gtcgttgtcgccggcaacaacaatgccagtcaggtggcggcgtcgccggaggggctcgac
atggtctctatccacccaaccccaaagctttctcaattttacgactttttctccattgct
cacctctctcctccgattcttcatttgaagaaagttgatggcagtgaagaagaagaagaa
gaagatggagagaggcgtgatggttaccattttggacttaaggttaagatttgcaatggg
aaggttatacatgtgattgcttcggtgaatggtttcttcgccgttggaaaacagctctca
cattgtcattccattgtagatttgcttcagaacgtcagcaatgcttttgccaaggcatat
gaatctctaatgaaagctttcactgaccggaacaagtttggcaacctcccgtatggatta
cggattaatacatggcttgtacctcctcctgtttctgagtctacttcaactttttctcct
ttaccaacagaggatggacaatggggagggaatggtggtggtcagtggatgaatggtgaa
tacaatcttcgaccttgggctgctgagttttctgtattagctacgcttccttgcaagact
gaggaggagagggttgttcgagataagaaagctttcttgcttcataatcagtttctcgac
acctctgtgcaaagagctgttagagccatttgcgacgtgatggatactaatcaacacact
actggattaagttcaggctcgatccttcttgaggatcatgttggagatttgtttattact
gtaaaacgtgatatagccagccttgacccaaagcctgaagctacatgtcaaaatgaacca
tttgttctatcatccaaggaacttgctgaaaagaatttgctaaaaggcataacagctgat
gagagtaagattgttcacgatactctggctttaggcacagttattgtaaggcactgtgga
tatacagcggtggtacatgtcgagggtaaaacgcagaaggcaatgtctgatatccgtgat
attttaattgatgacctgccggacggaggagctaatgctcttaaccttaacagcttaagg
gttcagcttcacagggcccatagtgttggaacatctggagagaaccagcccacacagctt
gattcggatgatatagagtcttataaatgtattgcaccgaagttcgtaaaggttaactta
acaaaattagaagagaaatgggtatcttctgtaagacccattagatgggagctcggttct
tgctgggttcagcatctacaaaagaaagaaacagacgtctgtggaaagcctgcaactaat
gatgagactgaactttcagttaaaggcttggggaaacaatttaaagttttaaagaccaaa
agtaagaaatcagaaaataatcgtaccgtgaaggaaaaggaaaaagatatcagactacac
gagttaaatggggaggctgatctagggaagaaaagcattgacgaacattttgagactgaa
ctgaaggaactgctttctgaacaagctttctctcgcctaaaagaaactggaaccggtctc
catttaaagtcaaaagaagagcttactaagatggtatatggttactatgatgaaattgct
ttgccaaggctggtagcagatttcgggtcactggagctttctccagttgatggtcgcaca
atgactgacttcatgcatattagaggtctccaaatgcgttcgctaggacatgtggctaaa
cttgctgagaaacttcctcatatacagtccatctgtatacatgagatgattacgagagct
ttcaagcatcttcttagggcggttattgcatctgtcaataatatggcaaagctacctgtg
gcagtagctgcatcattaaacttcatgcttggccgccgtgaatcggaagggtgtgatagg
gtccctagtgaagagtattgtctcagattacaatggctacagaattttctttccagaaaa
tttggttggatacagacagatgagttcaatcatttgaaaaaaatttccatcctccgagga
ctctgccaaaaggttgggttagaactagttccaagagattatgacttcgattctccaaat
cctttcaagagctctgacatttttggcttggtacctgtgtgcaagcatgtgctgtgtata
tcatctgacggaaggacactcttggagtcatcaaaaattgctcttgacaaaggaaaacta
gatgatgctgtgaattatggaacaaaggcattggtcaagatgattgctgtctgtgggcct
tatcatagaaatactgcttgtgcgtacagccttctcgcagttgtactgtaccacactggc
gattttaaccaggcaacgatatatcagcagaaggctctagatataaatgagagagaactt
ggtctcgaccatcctgacactatgaaaagctatggggatctttctgtattttattatcgt
cttcaacactttgaattggcactaaaatatgtgaaccgtgcgttgtttcttcttcacttc
acttgtgggctatctcacccaaatactgctgccacatatatcaatgtggctatgatggaa
aaagaagtagggaatgataatctagctctaagatacttgcatgaagctctaaagtgcaat
aaaagattgctaggagcggaccatattcagacagcggcaagctatcatgcaattgctgtg
gctctctcttttatggaagcacattcattgagtgtgcaacatgaacaaactacacttcag
atacttacagcaaaacttggaccagatgaccttcgtacacaggatgctgctgcatggctt
gaatattttgaatcaagagccatagagcagcaggaagcagcccgaaatggagtcccaaag
cctgatgcttccatcgcgagcaaaggccaccttagtgtatcagatctcgtggactatata
agttctgatcccgatactaaaggaagtgttgctcacaggaaacagcggcgcgccagggta
tcacaagccaatgatagtgttgcatcagctgatgatgccacccataaagttgctccacag
aatggcatcgctaaacggaatgatgtcatagaagcgaatgtcattgagaataggaccgaa
gaaaaagatcctgatgcagttgttgatgagatcaaaataggtgatatcgtagttcacaga
ctaaatgtagacagccgaattgtggaagagtcaactttagatgagggctggcaagaggca
tactcaaaggggagatctggaaatggtgcgagaaggaaaaggcagcctgatcttatgaaa
aagagaatgtcgtttaatagaaatctcactgggaaacaggatgttcagcaacagaactca
tcttctcggttgcagaaaacaactgtgagaccctccctctctaagccatcatcccatagg
gctcttaagaacacagagaaagatgtcagtaaaaatacaactaaaccacagtcaaaggct
tctggttctgctgctgcgaccagtattactttggcttcaaagtctctctcatacaaagat
gttgctgtggcaccaccaggtacagttctgaagccaatgttagaaaaagtagaattgcct
ttggagagcactgaaactcagatgtacaggatttcaagttcgtcagctgaagcagaaagc
aaatctgacactgtaatgttggatttgccaatcgaaggagcagagcttccctgtgaaaag
caggaatcacaagaaagtggtgagtcagtggaaaatttaacgtcagagtctgaaggggat
ctggggtcctgtgaggggcaaaaggcttctgatataagcaggaaaaagctatcagcctcc
gcagagccttacaatcctggaggtttcttggttattgatctgcaaagcttagcagcaaca
acaggcaagtacccgattctggttgcagaccctatttcctgggctggagtttcatgtggg
attcactcaccaccatattacagtgttaatcacttaaatggagttgggatgccaagaagc
atgaatccagatgcaccagagtttgttccgaggagatccgtgcagaatagctctcaacat
gcaggtggagatgcaagtgtatctgttgaccccagcagtggcctaaaagccgagtcagga
gatccctcaagggatagtgctgtaactgagatagtttatagtagagaagaggagagtgga
gcaaacgcaaatgagataaatggagatgaagggtttgtgattgtggcaaagaagaggagg
aagaacaagtttcgacttacaaacgatgcggctgggttgtaccatcaactgccgtcagtt
tgtgcatga
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