KEGG   Camelina sativa (false flax): 104775763
Entry
104775763         CDS       T05044                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104775763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104775763
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104775763
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     104775763
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 104775763
NCBI-ProteinID: XP_010497980
UniProt: A0ABM0YA41
LinkDB
Position
3
AA seq 573 aa
MGSSFPSSHPQLVGMHHGSPQLTGNMPQLRPSLLVNNPPSAQWMNRQNMFPGDNSGIMNN
MLPQHQLSHQNGLMPQQQRIPKMQVPQSRLLHPMQPHGHLPGMQPQTFNSHLSRSASSGS
YDAMLGFGDQREARPGSGQRNRHNMRFPQQGFDGGLQRRNNAWPPFRSKYMTADEIENIL
RMQLVATHSNDPYVDDYYHQGRLAKKSAGAKLKHHFCPNHLRDLPSRARTNNEPHAYLQV
DALGRVPFSSIRRPRPLLEMEPPNSNKSGNLDQKDTDKPLEQEPMLAARVIIEEGLYLFL
EVDDIDRFLEFNQLPDGGNQLRQKRQALLDGLAVSLQLVDPLGKNGQNSGLASQDLVFLR
ITSLRKGRKLLTRYLQLLYPGSDLMRIVCMAIFRHLRSLFGVRSSDAETTKTTIKLGKVV
ALCIHTMDLGPVSACLAAVSCSSEHPPLRPLGSPVGDESTIILKSALDRASELLSANNYN
NAGMNLWRASFDEFFNLLMKHCISKYDSIMQNLNSQLLPHFATEMSDAAAQAIVREMPIE
LLRASFPHISDEQKRILMEFLKPGSQKIESVVA
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgggatcttcatttccaagttctcatcctcagttggttggcatgcatcatggatcaccg
caactcactggaaacatgcctcaattgcgaccttctcttctcgtgaacaatcccccctca
gctcaatggatgaatcgccaaaatatgtttcctggggacaattctgggatcatgaacaat
atgttaccacaacatcagttatctcatcaaaacggtttgatgccgcaacagcagaggata
cctaagatgcaggttcctcagagtaggttactacatccgatgcaacctcatgggcatttg
ccaggaatgcagcctcaaacatttaattcccacctttctcgatcagcgtcctcgggcagt
tatgatgcaatgcttgggtttggtgatcagagggaagcaagaccaggatcggggcagagg
aacagacacaacatgcgctttcctcaacagggttttgatggtgggcttcagaggagaaat
aatgcatggcctcctttccggtcgaaatatatgacagctgatgaaatagagaacatctta
agaatgcagcttgtagctacacatagcaatgatccttatgtagatgattattaccaccag
gggcgtcttgctaagaagtctgctggcgccaaactgaagcatcatttctgtccgaatcat
ttaagagaccttccatctcgcgcacgtactaacaatgagccccatgcatatcttcaggtt
gatgctcttggtagagttcctttctcttcgatccgcaggcctcggcctctgcttgaaatg
gagcctccaaattcaaataaatctggtaatctggaccagaaagatacagacaagcccctt
gaacaagaaccaatgcttgcagccagggtgattattgaagaaggtctctacctcttcctc
gaggtagatgatattgaccggttcttagagttcaatcaactcccggatggtggaaaccag
ttgaggcaaaagcggcaagcgctgttggatgggcttgcagtgtcactgcagcttgttgac
ccacttggtaaaaatgggcaaaacagtgggcttgcatctcaggatcttgtctttctaagg
atcacctcccttcgaaagggtcggaagctacttacaaggtacctccagcttctttacccc
ggcagtgatctaatgcgaatcgtctgcatggctatttttagacacttaaggtctttgttt
ggagtgagatcatcagatgccgaaaccacaaaaacaacaatcaaacttggaaaagttgtc
gcgttatgcattcacaccatggatcttggacccgtaagcgcttgtctagcagcagtttct
tgttcttccgagcacccaccacttcgtcctttgggtagcccagttggagacgaatctact
attatactgaaatctgcactcgatagagcttccgagcttctcagtgctaacaattacaac
aacgcaggcatgaatctgtggcgtgcttcctttgatgagttctttaacttactgatgaaa
cactgcataagcaagtacgacagtataatgcagaacctgaattcgcaattgttaccacac
tttgccacagagatgtctgacgctgctgcacaagctattgtcagggaaatgcctatcgag
cttctacgtgcaagtttcccgcacattagtgatgagcaaaagagaatacttatggaattc
ttgaagcctggtagccagaaaattgaatcagttgtagcttga

DBGET integrated database retrieval system