Camelina sativa (false flax): 104775763
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Entry
104775763 CDS
T05044
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104775763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104775763
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104775763
mRNA degradation factors
5'-3' decay
Decapping complex
104775763
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
104775763
NCBI-ProteinID:
XP_010497980
UniProt:
A0ABM0YA41
LinkDB
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Position
3
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AA seq
573 aa
AA seq
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MGSSFPSSHPQLVGMHHGSPQLTGNMPQLRPSLLVNNPPSAQWMNRQNMFPGDNSGIMNN
MLPQHQLSHQNGLMPQQQRIPKMQVPQSRLLHPMQPHGHLPGMQPQTFNSHLSRSASSGS
YDAMLGFGDQREARPGSGQRNRHNMRFPQQGFDGGLQRRNNAWPPFRSKYMTADEIENIL
RMQLVATHSNDPYVDDYYHQGRLAKKSAGAKLKHHFCPNHLRDLPSRARTNNEPHAYLQV
DALGRVPFSSIRRPRPLLEMEPPNSNKSGNLDQKDTDKPLEQEPMLAARVIIEEGLYLFL
EVDDIDRFLEFNQLPDGGNQLRQKRQALLDGLAVSLQLVDPLGKNGQNSGLASQDLVFLR
ITSLRKGRKLLTRYLQLLYPGSDLMRIVCMAIFRHLRSLFGVRSSDAETTKTTIKLGKVV
ALCIHTMDLGPVSACLAAVSCSSEHPPLRPLGSPVGDESTIILKSALDRASELLSANNYN
NAGMNLWRASFDEFFNLLMKHCISKYDSIMQNLNSQLLPHFATEMSDAAAQAIVREMPIE
LLRASFPHISDEQKRILMEFLKPGSQKIESVVA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttcatttccaagttctcatcctcagttggttggcatgcatcatggatcaccg
caactcactggaaacatgcctcaattgcgaccttctcttctcgtgaacaatcccccctca
gctcaatggatgaatcgccaaaatatgtttcctggggacaattctgggatcatgaacaat
atgttaccacaacatcagttatctcatcaaaacggtttgatgccgcaacagcagaggata
cctaagatgcaggttcctcagagtaggttactacatccgatgcaacctcatgggcatttg
ccaggaatgcagcctcaaacatttaattcccacctttctcgatcagcgtcctcgggcagt
tatgatgcaatgcttgggtttggtgatcagagggaagcaagaccaggatcggggcagagg
aacagacacaacatgcgctttcctcaacagggttttgatggtgggcttcagaggagaaat
aatgcatggcctcctttccggtcgaaatatatgacagctgatgaaatagagaacatctta
agaatgcagcttgtagctacacatagcaatgatccttatgtagatgattattaccaccag
gggcgtcttgctaagaagtctgctggcgccaaactgaagcatcatttctgtccgaatcat
ttaagagaccttccatctcgcgcacgtactaacaatgagccccatgcatatcttcaggtt
gatgctcttggtagagttcctttctcttcgatccgcaggcctcggcctctgcttgaaatg
gagcctccaaattcaaataaatctggtaatctggaccagaaagatacagacaagcccctt
gaacaagaaccaatgcttgcagccagggtgattattgaagaaggtctctacctcttcctc
gaggtagatgatattgaccggttcttagagttcaatcaactcccggatggtggaaaccag
ttgaggcaaaagcggcaagcgctgttggatgggcttgcagtgtcactgcagcttgttgac
ccacttggtaaaaatgggcaaaacagtgggcttgcatctcaggatcttgtctttctaagg
atcacctcccttcgaaagggtcggaagctacttacaaggtacctccagcttctttacccc
ggcagtgatctaatgcgaatcgtctgcatggctatttttagacacttaaggtctttgttt
ggagtgagatcatcagatgccgaaaccacaaaaacaacaatcaaacttggaaaagttgtc
gcgttatgcattcacaccatggatcttggacccgtaagcgcttgtctagcagcagtttct
tgttcttccgagcacccaccacttcgtcctttgggtagcccagttggagacgaatctact
attatactgaaatctgcactcgatagagcttccgagcttctcagtgctaacaattacaac
aacgcaggcatgaatctgtggcgtgcttcctttgatgagttctttaacttactgatgaaa
cactgcataagcaagtacgacagtataatgcagaacctgaattcgcaattgttaccacac
tttgccacagagatgtctgacgctgctgcacaagctattgtcagggaaatgcctatcgag
cttctacgtgcaagtttcccgcacattagtgatgagcaaaagagaatacttatggaattc
ttgaagcctggtagccagaaaattgaatcagttgtagcttga
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