Camelina sativa (false flax): 104775812
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Entry
104775812 CDS
T05044
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104775812
Spliceosome [BR:
csat03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104775812
Other components
Complex C specific factors
104775812
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
104775812
NCBI-ProteinID:
XP_010498050
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Position
3:7676800..7679636
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AA seq
853 aa
AA seq
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MDEYQEMERFSMDNDYEGGRWEGDEFVYEKRKEKRKQTKHDATYGIFAESDSDSDGSSGG
GGRRKRRKDRDSGMKADSTKPVNFVSTGTVSPTREIDKDSREHNGDKNSDKIEDGDMIDE
DVPVRGGLGIGSSGLGLGLGFNSNGFNDEDNLLPGALGKKIADRAKMRGKAKMEKRGQEG
GSAKGGKKKTLAGDIGQFEKSTKGIGMKLLEKMGYKGGGLGKNQQGIVAPIEVQLRPKNM
GMGYNDFKEAKLPDLKKVEEKKIVGVSVSENEQRHGDTGGRNLWKKKKKVRKEVYVTAEE
LLEKKQEEGFGGGQTIIDMRGPQVRVVTNLENLDAEEKAKDPDVPMPELQHNLRLIVDLV
EHEIQKIDRDLRNERESALSLQQEKEMLITEEEKQKRHLVNMEYIADEISRIELENTSGN
LTLDSLANRFEDLQASYPDDYKLCNLSTIACSLALPLFIRMFQGWDPLRDAVHGLQAISS
WRKLLEVQEDQNIWVVSTPYSQLVSEVVLPAVRIAGINSWEPRDPEPMLTFLETWENLLP
SSVLHTILDTVVLPKLSTAVEYWDPQRERVAIHVWVHPWLPILGQKLEFMYQIIQMKLSN
VLDAWYPNDQSVYTILSPWKTVFDATSWEQLMRRYIVPKLQLVLQEFQVNPRGQDLERFH
WVMMWASAVPIHLMADLMERFFFPKWLDVLYHWLLSKPSFEEIHGWYSGWKSLFPQELSA
NERIRIQLKRGLDMLMEIVEGVEVSQPRAKANVHRQFEPAKAQPQTKAQQMDSTEVLSLK
EVLEVFAQEKELLFKPKPNRMHNGLQIYGFGNVSVIIDSVNQKLFAQKDGAWFLVTPDDL
LRMHNNTTVSGKR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatcaagagatggagagattcagtatggataatgactatgaaggaggtcga
tgggaaggtgacgagtttgtgtacgaaaagaggaaggagaagcggaaacaaaccaaacac
gacgctacttatggaatcttcgctgagagcgattctgattccgatggttctagcggcgga
ggaggtcggaggaagaggcgtaaggatcgagactcgggaatgaaggccgactcaaccaag
cctgtcaattttgtttctacaggtacggtatcgccgactcgagagattgataaggattct
agagaacataacggtgataaaaatagtgataaaatagaagatggtgatatgattgatgag
gatgtcccagttagaggtggattgggtattggaagctcaggtttagggttagggttaggg
tttaattcgaatggttttaatgatgaggacaatctcttaccgggtgctctggggaagaag
atagctgatagggcaaagatgagagggaaggcaaagatggagaagagaggtcaagagggt
ggtagtgcaaagggagggaagaagaagactttggccggtgatataggtcagtttgagaag
tctactaaaggaattggtatgaagctgcttgaaaagatggggtataagggaggtgggctt
gggaagaatcagcaaggtattgtcgctcctattgaagtgcagttgaggccgaagaatatg
ggtatggggtacaatgatttcaaggaggctaagttgcctgatttaaagaaggttgaggag
aagaagattgttggtgtcagtgtcagtgagaatgaacagcgtcatggtgataccggaggg
agaaatctttggaagaagaagaagaaggtgaggaaggaagtttatgtcactgcagaggag
ttgttagagaagaagcaggaagagggttttggtggtggtcagaccattattgatatgcga
ggaccacaggttcgggttgtgacgaatttggaaaatttagatgcagaggagaaagcaaaa
gacccagatgttccaatgccagagttacaacacaacttgcgcttgattgtcgatctagtt
gagcatgaaattcagaagattgatagggacttgaggaacgagagagaatcagccttgagc
ttacagcaggagaaggaaatgcttataacagaggaagagaaacaaaaaagacacttagtc
aacatggaatatatcgcagatgaaataagtcgaatcgagctggagaatacatctgggaat
ttgacacttgactcacttgctaatcgtttcgaggacctgcaagcaagctaccctgatgat
tataagctttgtaacttgtccaccattgcttgctcactggccttgcctctctttatcaga
atgtttcaaggttgggaccctcttagggatgcagtgcatggtctccaggctatatcttct
tggagaaagcttttagaagtccaggaagaccaaaatatctgggtagtctcaacgccttat
agccaactagtctcggaggtagtgttacctgctgtgcgaatagcaggcattaattcctgg
gaacctagagaccctgagccgatgcttacatttctagagacatgggaaaatttgctgcct
tcatctgtcttgcatacgattttggacacagtagtgctgccaaaattgtcaactgctgtt
gaatattgggatccccaaagggaacgtgttgccatccatgtttgggtgcatccttggttg
cctatacttggtcagaagttggagtttatgtaccagataattcagatgaaattgagtaat
gttcttgatgcttggtatcctaatgatcagtctgtctacactattctttcgccatggaag
accgtttttgatgctacaagctgggaacagcttatgcgccgttacatagttcccaaactt
cagctggttttgcaagagtttcaggtaaacccgagaggccaggatttagaaaggttccat
tgggttatgatgtgggcatctgcagtacccatacatctaatggctgatttgatggagagg
ttcttcttcccaaaatggctggatgtgttgtaccattggttactgtctaaaccgagtttc
gaagagatccacggatggtattctggttggaaatcattattcccgcaagagctttcagca
aacgagaggatcagaatccagttaaagcgtggtttagatatgttgatggaaatagttgaa
ggagttgaagtgtctcagccaagggcaaaggcaaatgtgcatagacagttcgagccagct
aaggctcaacctcaaactaaggctcagcagatggatagcactgaggtgctgagtttgaaa
gaagtgttggaagtatttgcgcaagagaaggagttgctgttcaaacctaaaccgaataga
atgcacaatggtcttcagatatatgggtttgggaacgtgagtgtgataatagactcagtg
aatcagaagctgttcgctcagaaagatggagcttggtttcttgtaactcctgatgactta
ttgaggatgcacaacaatacaactgtttctggaaaacggtag
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