KEGG   Camelina sativa (false flax): 104775950
Entry
104775950         CDS       T05044                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03022  Basal transcription factors
csat03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104775950
  09124 Replication and repair
   03420 Nucleotide excision repair
    104775950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104775950
   03400 DNA repair and recombination proteins [BR:csat03400]
    104775950
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     104775950
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     104775950
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 104775950
NCBI-ProteinID: XP_010498221
LinkDB
Position
3:complement(8282882..8285199)
AA seq 301 aa
MPSVASKQYSDDVSLLVLLLDTNPLFWSNTSITFSQFLSHVLAFLNAVLGLNQLNQVVVI
ATGYSSCDYIYDSSLTSNHGNFESRGTGMPPLFASLLKKLEDFVTKDEELSREEGHEDRT
PSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVP
IDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPIGV
DFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDEASSVSDKKRKAPH
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccttccgttgcttctaagcagtattcagacgatgttagtcttctagtcttgttgctt
gatacgaatccccttttctggagcaatacttcgattacattctctcaattcctttctcat
gtgcttgcgtttctgaatgcggttttggggttgaatcaattgaaccaagttgtagtaata
gctactggatacagttcctgtgattacatttatgattcgtctttgacatctaatcatggg
aatttcgagagcagaggaaccgggatgcctcctctctttgcttctttgctgaagaaactg
gaagattttgttaccaaagatgaggagctcagcagggaggaggggcatgaggatagaact
ccttcttgtctcttatcaggatcactctccatggctctttgctatatacagagggttttc
cgttctggacatcttcatccccagcctcggattttatgcttgcaaggttctccagatggc
ccggaacaatatgtagctgttatgaattctattttctctgcccagcgcttaatggttccc
atagattcatgttacataggtgtacaaaactcagcgtttttgcagcaggcatcttatata
accggtggtgtacatcacacacctaaacagttggatgggctgtttcagtatctaacgaca
atctttgcaactgatttgcactcccgcggttttgtacaacttcctaaacccataggtgtt
gattttcgagcatcgtgtttctgccacaagaagactatcgatatgggctacatatgttca
gtgtgtctgtccattttctgtgagcatcacaagaaatgctcaacgtgcgggtcagttttt
ggtcagtcaaaacttgatgaagcttcatctgtctctgataagaagagaaaagctcctcac
acctaa

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