Camelina sativa (false flax): 104776180
Help
Entry
104776180 CDS
T05044
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104776180
09124 Replication and repair
03420 Nucleotide excision repair
104776180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
csat03051
]
104776180
03400 DNA repair and recombination proteins [BR:
csat03400
]
104776180
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104776180
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104776180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Dsc3_N
Rad60-SLD_2
UBA_3
TECR_N
SIP1
Crinkler
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
104776180
NCBI-ProteinID:
XP_010498530
LinkDB
All DBs
Position
1:complement(502728..506310)
Genome browser
AA seq
420 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDSVADVKKNIETVQGADVYPAAKLMLIHQGKVLKDETTIE
ENKVAENSFIVIMMAKSKPASTGASSASAGTPLAKSISPSTSQPSVSTQTAASVATPVAP
APTRPPPPAPTPLPTPVPVAATETVTVPEPVPATIPASTPAPDSAPVGSQGDDVYGQAAS
NLAAGSNLDSTIQQILDMGGGTWDRDTVVHALRAAFNNPERAVEYLYSGIPEQAEVPTVF
RAPASGGQPANPSTQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQF
QALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNILGQL
AAEMPQPQAIQVTPEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatttgtgaaaactctcaaggggactcacttcgagatcgaagtcaaacccgag
gattcggtcgctgatgtgaagaagaacatcgagactgtacagggcgcagatgtatatcct
gctgcaaaactgatgcttattcaccaaggtaaagttcttaaagatgagacaacaattgag
gagaacaaagttgctgagaacagttttatcgtcattatgatggccaagagtaaacctgct
tcaactggagcatctagtgcatctgctggcacaccgctggccaagtcgatatctccctca
acatcacagccttcagtttctactcagactgcggcttctgtagcaacaccagtggcccct
gcaccgacacgtccgccaccacctgcaccgacaccgctgcctacacctgtacctgtagct
gcaactgaaactgtgactgtacctgaacctgtgcccgctactatacccgcaagcactcct
gcaccagactcagctcctgtgggaagtcaaggtgatgatgtttacggacaagcagcatcg
aatctagccgctggaagtaatttagacagtaccattcagcaaattcttgacatgggtgga
ggaacctgggatcgtgacactgttgttcatgcactccgtgctgcatttaataatcctgaa
agagctgtggaatatctttactctgggatccctgagcaagctgaagttccaacagttttc
cgtgctccagctagtggtggacagccagcaaatccttcaacacagactcagcaacccgca
gcagcacccgcaagtggccctaatgcaaatccgttagatctcttcccacagggcttgcca
aatgttggcggaaatcctggtgccggaacacttgacttcctgcgcaacagccaacagttc
caagctctgcgagcaatggtgcaagcaaaccctcaagttctgcagcctatgcttcaggaa
ctgggaaagcaaaacccaaacttgatgcggttgattcaagatcaccaggctgacttctta
cgcttaataaatgaacctgttgaaggagggggtgagagtggcaatatccttggccaattg
gcggcggagatgccacagccacaagcgattcaagtcacacctgaggaacgcgaagcaatt
gaacggcttgaagcaatgggattcgagagagcactggtattggaagtgttttttgcgtgc
aacaagaacgaagagttggctgcaaactatcttttagatcacatgcatgagttcgaggaa
taa
DBGET
integrated database retrieval system