Camelina sativa (false flax): 104776263
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Entry
104776263 CDS
T05044
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104776263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104776263
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104776263
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GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
104776263
NCBI-ProteinID:
XP_010498599
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Position
3:9743356..9745869
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AA seq
362 aa
AA seq
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MVMVGEETSSMEVDQCFLKMKMEGVSIKEWKDIPVELLIRILSLVDDRNVIVASGVCSGW
RDAISLGLTRLCLSWCNNNMNRLVLSLAPKVAKLQTLILRQDKPQLEDNAVEAIANHCHE
LQELDLSKSLRLTDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCG
CVNAVSDYALEAIGNNCNQMQSLNLGWCENISDEGVMSLAYGCPDLRTLDLCGCVLITDE
SVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLN
ISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRAHNPVPHP
AH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggttggagaagaaacatcatccatggaagttgaccagtgttttcttaagatg
aagatggaaggggtttcgatcaaagagtggaaagacatccctgtggagcttctgataagg
attctttctcttgttgatgatcgtaatgtcattgttgcttctggtgtttgctctggctgg
agagatgctatctctcttggcctcactcgcctctgtctctcttggtgcaacaacaacatg
aacagattggttctttctcttgctcccaaggtcgcaaagctgcagactttaatactgcgg
caggacaaaccacagctagaggacaatgcagtggaggccatagcaaatcactgccatgag
ctacaagagcttgatctcagcaaaagtttgagacttaccgatcgttccctctatgcactt
gctcatggttgtcctgacctcacaaaactcaaccttagcggatgcacttcattcagcgac
actgctattgcgtatctgaccagattctgcagaaagcttaaagttttgaatctctgcgga
tgtgtcaatgctgtatctgactatgctttggaggctattgggaataactgcaatcagatg
cagtcactaaatttgggatggtgtgagaatatcagtgatgaaggggtaatgagtttagcg
tatggctgcccagatctcaggacccttgacctttgtggatgtgttctaattacagatgag
agtgtggtagctctagcagactggtgtgtccacttgaggtcactggggttatactactgc
agaaacataactgacagggcgatgtactcacttgctcaaagtggggtaaagaacaaaccg
ggttcatggaaatcggttaagaaaggcaaatacgatgaggaaggattgagaagtctcaac
attagccaatgcactgcccttacaccttcagcggttcaagctgtttgcgataccttccct
gctcttcacacatgttctggaaggcattcacttgtcatgagcggttgtctgaacttgaca
tctgtgcactgtgcttgtatccttcaggctcatcgcgcacacaacccggttcctcatccg
gctcactaa
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