Camelina sativa (false flax): 104776349
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Entry
104776349 CDS
T05044
Name
(RefSeq) synaptonemal complex protein 1-like isoform X1
Organism
csat
Camelina sativa (false flax)
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Gene cluster
GFIT
Motif
Pfam:
CENP-F_leu_zip
Crescentin
Motif
Other DBs
NCBI-GeneID:
104776349
NCBI-ProteinID:
XP_010498695
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Position
3:10210355..10216188
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AA seq
849 aa
AA seq
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MQKLGFPAMKSLDQLRSMSGSAKTHSFSTRPPQDSVVSGSFSNLKLTAEKLVKDQAAMRT
DLELANCKLKKSVEHVYALEDKLQNAFNENAKLRVRQKEDEKLWRGLESKFSSTKALCDQ
LTETLQHLASQVQDAEKDKDFFESKFNTSSEAIDSLNQQMQDMSLSLDAAKANITSRDKE
FEELKLEKEQKDIYYLNEQCRTASIIEKKDAEITKLEATAAERKLNVENLNSQLEKVHLE
LTTKEDEVKDLVSIQEKLEKEKTSVQLSANELFEKLVSSEQEVKKLDDLVRYLAAELTNL
DKKNLTFTEKFGQLSGLYDTHFLLLQKDRDLAIDRAQRSFDQLQREFFSVTAKKEALESA
GKELNEKIVELQADKESLISQVSGIRCSTSQTIDKLESEAKGLVSKHAEAESVISKLKEE
IETLLEIVKTSEDKKQKLSLKLSSLEMENKEKYEKLQADAQRKVEELEALQKESESHQLQ
ADLLAKEVNELQTVIEEKGRLIHQCNENEKKLNQQLIKDKELLVTAETKLVEAKKQYDMM
LESKQLELSRHLKELSQRNDQAINVIRRKYDVEKQEIVNAEKDKVEKIIKELSTKYDKEL
SDCKEESKGKLLTVQTEHASLILSIRKEHESKELNLKAKYDQELRQNQIQAENELKERIT
ALKSENDVQLKAFKCQYEDDCKKLQEELDLQRKKEERQRALVQLQWKMMSDNPPEEQEVN
SNKNYSISKDSRLGGSKRSEHIRVRTDHDDEQDSAFVKAKETPVSKILKKTHNVKTGSVP
SIPNPKHHSRVSHREYEVETNNGRVTKRRKTRNTAMFEEPQRRSTRLTPKLKTPKSIAKG
GMMTGSAFD
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagttagggtttccggcgatgaaaagcttggatcaactccgatcgatgtccgga
tcggcgaagacgcactccttctccactcgtccgccgcaggattccgtcgtctccggaagt
ttctcgaatctgaagctcactgcagagaagctggtgaaggatcaggcggctatgagaaca
gatctagaactggcgaattgtaagctgaaaaagtcagtggagcatgtctatgccttagag
gataaacttcagaacgcttttaatgagaatgctaagctcagagttaggcaaaaggaagat
gaaaagctttggagaggattggagtctaagttctcttcaacaaaggctctgtgtgatcag
cttactgagactctgcagcacttggcttcccaagttcaggatgctgagaaggataaggac
tttttcgagagcaaattcaatactagttcagaagcaatagactctttaaaccagcaaatg
caagatatgtctttaagcttagatgctgctaaagcgaacatcacaagcagggataaggaa
tttgaggagctcaaactcgagaaagaacagaaggatatatactatctaaatgaacagtgc
agaactgccagtatcatagagaagaaagatgctgagataacaaagttggaagcaactgca
gccgaaagaaaactcaacgttgaaaacttgaattcccaactagaaaaggtacatcttgag
ttaacaacaaaagaagacgaggtcaaagaccttgttagtatccaagagaaattggaaaaa
gaaaagacgagtgttcagctgagtgcaaatgaactgtttgaaaaactggtcagctccgaa
caggaggttaaaaagctcgatgacctggtccgctacttggcagccgagttgactaatctg
gataaaaagaatttgaccttcacggagaagtttggtcaacttagtggcctatatgatacc
cactttctgttgctgcaaaaagacagagatcttgcaattgatcgtgctcaaagatcattc
gatcaactccagcgtgagttctttagcgtaactgccaaaaaagaagctttggaatcagca
ggaaaggaactaaacgagaaaatagttgagctccaggctgataaggagtctttaatatct
caagtttctgggatacggtgttctacaagccagaccattgataaactggagtctgaagca
aaaggactagtttcaaaacatgctgaggcagaatcagtgatttcaaagctgaaagaggaa
atagaaactttattggaaattgtgaagacatcagaggataagaagcaaaaattgtcgttg
aagctttcatcattagagatggaaaacaaagaaaaatacgagaaactgcaggcagatgca
cagagaaaagttgaggaactagaggccttgcagaaagagagtgagagccatcagctgcag
gcggatttattggcaaaagaggtgaacgagctccaaaccgtcatagaggagaaagggcgt
cttatccaccagtgcaatgaaaacgagaagaagcttaaccaacaactcattaaggacaag
gagttactggtaactgctgaaactaagcttgtagaagcaaagaagcaatatgatatgatg
ctggaaagcaaacagttggaattatcaaggcacttgaaagaattatcacagaggaatgac
caggcaattaatgttatcaggaggaagtatgacgtcgagaagcaggaaattgttaatgct
gaaaaggataaggttgaaaagattattaaagagttgtccactaaatatgataaagaactc
tcagattgcaaagaagaatcaaaggggaaactgctgaccgttcaaacggaacatgcttct
ctgattctcagtattcggaaggagcatgagagtaaggagctcaacctcaaagctaagtat
gatcaggagctgagacaaaatcagattcaggctgaaaatgaactaaaagagaggataaca
gctctcaagagtgagaatgatgtccagttgaaagcattcaagtgtcagtatgaagatgat
tgtaagaaactgcaagaagaattagatcttcaaaggaaaaaagaagagaggcaaagagct
ttggtgcagttacagtggaagatgatgagtgacaatccacctgaagagcaagaagtaaac
tcaaacaagaactattcaatttcgaaagattctcgtcttggtggtagcaaaagaagcgag
catataagagtgaggacagatcacgatgacgaacaggactctgcttttgtaaaggcaaaa
gaaacacctgtgtccaaaatattgaagaaaactcacaacgtaaagacaggaagcgtcccg
agcattccaaatccaaagcatcatagtagggtatctcatcgtgagtatgaagttgaaacg
aacaatgggagggtaaccaaacgaagaaaaacaagaaatacagccatgtttgaggagcca
caaagacgcagtactagattgacacccaaattgaagacccccaaaagtatcgccaaggga
ggaatgatgactggctctgcatttgattga
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