Camelina sativa (false flax): 104776468
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Entry
104776468 CDS
T05044
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-1
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
csat
Camelina sativa (false flax)
Pathway
csat03010
Ribosome
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
104776468
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104776468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
csat03011
]
104776468
04121 Ubiquitin system [BR:
csat04121
]
104776468
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104776468
Ribosome [BR:
csat03011
]
Ribosomal proteins
Eukaryotes
Small subunit
104776468
Archaea
104776468
Ubiquitin system [BR:
csat04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
104776468
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104776468
Exosomal proteins of colorectal cancer cells
104776468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
TBK1_ULD
Ubiquitin_5
UBL_UBAC1
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
104776468
NCBI-ProteinID:
XP_010498849
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All DBs
Position
3:10831659..10832346
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AA seq
156 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHVHKKVKLAVLQFYKVDGSGKVQRLRKE
CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKTPDEE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctaacggggaagacgataacactagaggttgagtcatca
gacacgatcgacaatgtgaaagcgaagatccaagacaaggaagggatcccaccggatcag
cagcgtctgatctttgccgggaaacagctggaagacgggagaacgctagccgattacaac
atccagaaagagtcgacgcttcatttggtgctgcgtctgaggggaggtgcgaagaagagg
aagaagaagacgtacacgaagccaaagaagatcaagcacgtgcacaagaaggtgaagcta
gcggttctgcagttttacaaggttgatgggagtggtaaggttcagaggctgaggaaagag
tgtccttctgttagttgtggtcctggtacgttcatggcgagtcatttcgataggcattac
tgtggcaagtgtgggactacttacgtgttcaagacgcctgatgaagagtga
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integrated database retrieval system