Camelina sativa (false flax): 104776762
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Entry
104776762 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104776762
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104776762
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104776762
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104776762
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104776762
03009 Ribosome biogenesis [BR:
csat03009
]
104776762
03110 Chaperones and folding catalysts [BR:
csat03110
]
104776762
04131 Membrane trafficking [BR:
csat04131
]
104776762
03051 Proteasome [BR:
csat03051
]
104776762
03029 Mitochondrial biogenesis [BR:
csat03029
]
104776762
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104776762
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104776762
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104776762
Complex C
Prp19-CDC5 complex
104776762
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104776762
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104776762
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104776762
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104776762
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104776762
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104776762
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104776762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104776762
NCBI-ProteinID:
XP_010499184
LinkDB
All DBs
Position
1:complement(5128818..5131243)
Genome browser
AA seq
650 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRYSDPSVQSDLKHWPFTVKSGPAEKPMITVNYKGEEKQFSA
EEISSMVLIKMREIAEAFLGSPVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVDAKNALENYAYNMRNTIKDEKITSKLDAADKKKIEDAIDQAIEWLDGNQLAETDEFED
KMKELESLCNPIIARMYQGAGPDMGGAGGMEEDAPAGGSGGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaaggtgaaggtccagctatcggtatcgatctcggtaccacttactcttgc
gtcggtgtttggcaacacgaccgcgtcgaaatcatcgccaacgatcaaggaaaccgtacc
actccttcctacgttgctttcactgactccgagcgtctcatcggtgatgccgctaagaat
caggtcgccatgaaccctaccaacaccgtcttcgatgctaaacgtcttattgggagaaga
tacagtgatccgtcggttcaatcggatttgaagcactggccattcacggttaaatccggt
ccagctgagaagcctatgatcactgtcaactacaagggagaggagaaacagttctctgcc
gaggagatctcctctatggttctcattaagatgcgggagattgctgaagctttccttggc
tctcctgttaagaacgctgttgttaccgtacctgcttatttcaacgactctcagcgtcag
gcgactaaagacgctggtgttatctctggtctcaacgtgatgcgtatcatcaacgagcca
accgctgctgcgattgcttacggtcttgataaaaaggcgtcgagtgttggagagaagaat
gttttgatctttgatttgggaggtggtacttttgatgtttctttgcttacgattgaggaa
ggtatctttgaagtcaaggccacggctggtgacacgcatctcggtggtgaggactttgac
aacaggatggttaaccattttgttcaggagtttaagaggaagaacaagaaggatatcact
ggtaacccaagggctttgaggaggcttaggacagcttgcgagcgggccaagagaactctt
tcttctactgctcagacgactattgaaatcgactcgctctacgagggtattgacttctac
acaaccatcactcgtgctagattcgaggagctcaacatggatttgttcaggaagtgtatg
gagccagtggagaagtgtttgagagatgctaagatggacaagaacagtgtccatgatgtt
gtccttgttggtggctctacaagaatccctaaagtgcagcagcttttgcaagactttttc
aatgggaaagagctctgtaaaagcattaacccggatgaggctgttgcttatggagctgct
gttcaagctgcgatcttgagcggggaagggaatgagaaggtccaagacttgttacttctt
gatgtcactcctctgtccttgggtttggaaaccgccggtggggttatgactgtcctgatt
ccgaggaacacaactattccgacgaagaaagagcaggtattctctacgtattcagacaac
cagcccggtgttctgatccaggtctacgaaggggagagagcaaggacaaaggacaacaac
cttttgggaaagttcgagctcagcggtataccacctgctccacgaggtgttccccaaatt
acagtctgcttcgacatcgacgctaatggtatcctgaatgtgtcggctgaggacaagacg
actggtcaaaagaacaagatcacaatcacaaacgacaagggaaggttatcaaaggaagag
atcgagaagatggtacaagaagcagagaagtacaaggctgaggatgaagaacacaagaag
aaggttgatgcgaagaacgctctcgagaactatgcatacaacatgaggaacacgatcaag
gacgagaagatcacatctaagcttgatgcagctgataagaagaagattgaagatgcgatc
gaccaagctattgagtggttggatggtaatcagctggcggagacagatgagttcgaggat
aagatgaaggagctcgagtctctttgcaacccaatcattgctaggatgtaccaaggcgct
gggcctgatatgggtggtgctgggggaatggaagaagacgctccggctggtggtagcggc
ggtgctggccccaagattgaagaagttgattaa
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