Camelina sativa (false flax): 104776795
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Entry
104776795 CDS
T05044
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4-like
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104776795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104776795
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104776795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_IFT122_1st
PLCB1-4-like_EFh
Motif
Other DBs
NCBI-GeneID:
104776795
NCBI-ProteinID:
XP_010499227
LinkDB
All DBs
Position
3:complement(12634803..12638883)
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AA seq
810 aa
AA seq
DB search
MFEYKCSSIDWKPSPVVALATSSDGSQVAAAREDGSLEVWLVSPGASSWHCQLSIHGDPK
SRISHLAWFGTGSKSSSSARLFSSSIDGSISEWDLFDLKQKIVLESIGVSIWQIALAPLS
TEPEGKEAKLIQNGYLSEKSDDEEESGVEDDSEFEEVDEKAGALDRHLAAACDDGCVRIY
YISDSDKLTYYRSLPRVSGRALSVTWSSDAQRIFSGSSDGLIRCWDANLCREVFRITVGL
GGLGNGSELCIWSLLSLRCGVLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAAAPT
HNRVFSAGADGQVILYKLSGGTFESQDVKPSSTQKWDYIGCVRAHTHDIRALTVAVPISW
EGSRPDINAKVTSPKQRRKEKPVGFSYHKWAHLGVPMLISAGDDAKLYAYSVQKFTKFPP
HDICPAPQRVPMQMVHNTVFNQTSLLLVQESCSLDILRIHISNDSSGRVSTKPLVRVKSK
DARKIICSAISNRGSVFAYSDQIRPSLFELKKTKLGKNPWSASRKRLPNLPFAHSMVFSC
DSSRLIIAGHDRRIYILDLGSMDLLHSFTPRQDGKEGESPREPPITKLYSSSNDDWLAAI
NCFGDIYVVNLETQRQHWFISRLDGASVAAAGFHPRNNSVLVISTSSNQVFALDVEAREL
SKWSPLQTFCLPKSYQEFPGEVVGLSFSPSPSSSSVIIYSSRAKCLIEFGMPAEQDEETD
LPCNLSEKLEGKLASIGIKLGNGAQKRSLEEYQKESKSNKRKKFEMVTSKHPVPYLRHLS
KSAILVIEKPWMEVIKDLDTQPVHRHIFGT
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagtacaagtgcagctccatcgattggaaaccatctccggtggtagctcttgct
accagctccgacggctctcaggtcgctgcagctcgagaggatggttctcttgaggtttgg
ctcgtctctcccggtgcttcctcctggcactgtcaacttagcatccatggagatccaaaa
tcgagaatctcgcaccttgcgtggtttggtactggttctaaaagttcgtcttccgctaga
ttgttttcttcgagcatcgatggctcaatttcggagtgggatctttttgacttgaagcag
aagatcgtcctagagtcaattggagtatcaatctggcaaatagcattggcacctctttca
actgaaccagaaggtaaagaagctaagctgattcagaacgggtacttgagtgagaaatca
gatgacgaggaggaaagtggagttgaagatgattcagagtttgaggaggttgatgagaaa
gcgggggccttggataggcatcttgctgctgcctgtgatgatggctgcgtgaggatttat
tatatctctgattcagacaagttaacctactatagatctttgcctagggtcagtggtcgt
gctttaagtgtgacgtggagttcggacgcacagagaatcttttcaggcagtagtgatggg
ctgataaggtgctgggatgctaatctctgccgtgaggtatttagaatcactgttggactt
ggaggactgggaaatggttctgagctctgcatttggtcacttctttcattaaggtgtgga
gttcttgttagtggagatagtacaggaagtgtccagttttgggatagccagcatggaacc
ctgttacaggcgcattctaatcacaagggtgatgtcaatgcccttgcagcagccccaact
cataaccgggtgttttctgcaggcgctgatggacaggttattctatataagctctctggt
ggtacatttgaatcgcaagatgttaaaccttcttccactcagaagtgggattatatcggt
tgtgtaagggctcatacacatgacatcagggctctaactgtcgcagtgccaataagttgg
gaaggttcccgtccagacattaatgcaaaagtaacaagtccgaaacagcgcaggaaagag
aagccggttggtttcagttaccataaatgggcacatttgggggttccgatgctcatttca
gctggtgatgatgcaaagctttatgcatactcggttcaaaagttcactaagttccctcca
catgatatatgtcctgcgcctcagagagtacccatgcagatggtacataatacagtgttc
aatcagacttctcttctcttggttcaggaatcttgttctttagatattcttcgtattcac
ataagtaatgattctagtgggcgtgtctccaccaagccattggttcgtgttaaaagtaaa
gatgcccggaagatcatatgcagtgcaatttctaacagaggatcagtttttgcttattct
gatcaaattcgcccaagtctgtttgagttgaagaaaactaaacttggaaagaatccatgg
agtgccagtagaaagcgacttccgaatcttccgtttgctcattccatggttttcagctgt
gactcctctcggctgataattgctggacatgatagaaggatatatattcttgacttgggt
agcatggacctattacattcttttactccacgccaggatgggaaggaaggtgaatctcct
cgcgagcctccaatcacaaaattgtatagtagctccaatgatgattggttagctgctatc
aattgttttggggacatatatgtggtcaacctggaaacgcagaggcagcattggttcata
tcaaggcttgatggtgcatctgttgcagcggctggttttcatcccaggaacaacagtgtg
cttgtgatctcgacatcttcaaaccaggtctttgcgttggacgtggaggctagagagtta
agcaagtggtcaccactgcagactttttgtttgccaaagagctaccaagaatttcctggt
gaggtcgtaggactctcattctcgccatcaccaagttcttcgtctgtaatcatttacagc
tccagagctaagtgtttgattgaatttgggatgccggctgagcaagacgaagaaacggat
ttgccatgcaacctgtctgaaaagctagaaggtaaacttgcaagcattggtattaaactg
gggaatggtgctcaaaaacgtagtttagaggagtatcaaaaagagagcaagagtaacaag
agaaagaagtttgaaatggtaacttcaaagcacccagttccatatttaaggcatctatca
aaaagtgcaattttggttatagagaaaccatggatggaggttatcaaggatttggataca
caaccagttcacagacatatatttgggacataa
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