KEGG   Camelina sativa (false flax): 104776795
Entry
104776795         CDS       T05044                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4-like
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104776795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csat03009]
    104776795
Ribosome biogenesis [BR:csat03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104776795
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd WD40_Prp19 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_IFT122_1st PLCB1-4-like_EFh
Other DBs
NCBI-GeneID: 104776795
NCBI-ProteinID: XP_010499227
LinkDB
Position
3:complement(12634803..12638883)
AA seq 810 aa
MFEYKCSSIDWKPSPVVALATSSDGSQVAAAREDGSLEVWLVSPGASSWHCQLSIHGDPK
SRISHLAWFGTGSKSSSSARLFSSSIDGSISEWDLFDLKQKIVLESIGVSIWQIALAPLS
TEPEGKEAKLIQNGYLSEKSDDEEESGVEDDSEFEEVDEKAGALDRHLAAACDDGCVRIY
YISDSDKLTYYRSLPRVSGRALSVTWSSDAQRIFSGSSDGLIRCWDANLCREVFRITVGL
GGLGNGSELCIWSLLSLRCGVLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAAAPT
HNRVFSAGADGQVILYKLSGGTFESQDVKPSSTQKWDYIGCVRAHTHDIRALTVAVPISW
EGSRPDINAKVTSPKQRRKEKPVGFSYHKWAHLGVPMLISAGDDAKLYAYSVQKFTKFPP
HDICPAPQRVPMQMVHNTVFNQTSLLLVQESCSLDILRIHISNDSSGRVSTKPLVRVKSK
DARKIICSAISNRGSVFAYSDQIRPSLFELKKTKLGKNPWSASRKRLPNLPFAHSMVFSC
DSSRLIIAGHDRRIYILDLGSMDLLHSFTPRQDGKEGESPREPPITKLYSSSNDDWLAAI
NCFGDIYVVNLETQRQHWFISRLDGASVAAAGFHPRNNSVLVISTSSNQVFALDVEAREL
SKWSPLQTFCLPKSYQEFPGEVVGLSFSPSPSSSSVIIYSSRAKCLIEFGMPAEQDEETD
LPCNLSEKLEGKLASIGIKLGNGAQKRSLEEYQKESKSNKRKKFEMVTSKHPVPYLRHLS
KSAILVIEKPWMEVIKDLDTQPVHRHIFGT
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgtttgagtacaagtgcagctccatcgattggaaaccatctccggtggtagctcttgct
accagctccgacggctctcaggtcgctgcagctcgagaggatggttctcttgaggtttgg
ctcgtctctcccggtgcttcctcctggcactgtcaacttagcatccatggagatccaaaa
tcgagaatctcgcaccttgcgtggtttggtactggttctaaaagttcgtcttccgctaga
ttgttttcttcgagcatcgatggctcaatttcggagtgggatctttttgacttgaagcag
aagatcgtcctagagtcaattggagtatcaatctggcaaatagcattggcacctctttca
actgaaccagaaggtaaagaagctaagctgattcagaacgggtacttgagtgagaaatca
gatgacgaggaggaaagtggagttgaagatgattcagagtttgaggaggttgatgagaaa
gcgggggccttggataggcatcttgctgctgcctgtgatgatggctgcgtgaggatttat
tatatctctgattcagacaagttaacctactatagatctttgcctagggtcagtggtcgt
gctttaagtgtgacgtggagttcggacgcacagagaatcttttcaggcagtagtgatggg
ctgataaggtgctgggatgctaatctctgccgtgaggtatttagaatcactgttggactt
ggaggactgggaaatggttctgagctctgcatttggtcacttctttcattaaggtgtgga
gttcttgttagtggagatagtacaggaagtgtccagttttgggatagccagcatggaacc
ctgttacaggcgcattctaatcacaagggtgatgtcaatgcccttgcagcagccccaact
cataaccgggtgttttctgcaggcgctgatggacaggttattctatataagctctctggt
ggtacatttgaatcgcaagatgttaaaccttcttccactcagaagtgggattatatcggt
tgtgtaagggctcatacacatgacatcagggctctaactgtcgcagtgccaataagttgg
gaaggttcccgtccagacattaatgcaaaagtaacaagtccgaaacagcgcaggaaagag
aagccggttggtttcagttaccataaatgggcacatttgggggttccgatgctcatttca
gctggtgatgatgcaaagctttatgcatactcggttcaaaagttcactaagttccctcca
catgatatatgtcctgcgcctcagagagtacccatgcagatggtacataatacagtgttc
aatcagacttctcttctcttggttcaggaatcttgttctttagatattcttcgtattcac
ataagtaatgattctagtgggcgtgtctccaccaagccattggttcgtgttaaaagtaaa
gatgcccggaagatcatatgcagtgcaatttctaacagaggatcagtttttgcttattct
gatcaaattcgcccaagtctgtttgagttgaagaaaactaaacttggaaagaatccatgg
agtgccagtagaaagcgacttccgaatcttccgtttgctcattccatggttttcagctgt
gactcctctcggctgataattgctggacatgatagaaggatatatattcttgacttgggt
agcatggacctattacattcttttactccacgccaggatgggaaggaaggtgaatctcct
cgcgagcctccaatcacaaaattgtatagtagctccaatgatgattggttagctgctatc
aattgttttggggacatatatgtggtcaacctggaaacgcagaggcagcattggttcata
tcaaggcttgatggtgcatctgttgcagcggctggttttcatcccaggaacaacagtgtg
cttgtgatctcgacatcttcaaaccaggtctttgcgttggacgtggaggctagagagtta
agcaagtggtcaccactgcagactttttgtttgccaaagagctaccaagaatttcctggt
gaggtcgtaggactctcattctcgccatcaccaagttcttcgtctgtaatcatttacagc
tccagagctaagtgtttgattgaatttgggatgccggctgagcaagacgaagaaacggat
ttgccatgcaacctgtctgaaaagctagaaggtaaacttgcaagcattggtattaaactg
gggaatggtgctcaaaaacgtagtttagaggagtatcaaaaagagagcaagagtaacaag
agaaagaagtttgaaatggtaacttcaaagcacccagttccatatttaaggcatctatca
aaaagtgcaattttggttatagagaaaccatggatggaggttatcaaggatttggataca
caaccagttcacagacatatatttgggacataa

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