Camelina sativa (false flax): 104776851
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Entry
104776851 CDS
T05044
Name
(RefSeq) sphingosine-1-phosphate lyase isoform X2
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00600
Sphingolipid metabolism
csat01100
Metabolic pathways
Module
csat_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104776851
Enzymes [BR:
csat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
104776851
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
104776851
NCBI-ProteinID:
XP_010499293
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Position
3:12922907..12927611
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AA seq
544 aa
AA seq
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MDYFSYSSMKSMVIQARGSLNSRLSEFEPLFLLLAPLLTLFFAQIIGSVLGVVNDKGLKA
CLVGFIMGFLKMIPGVQNYIDAEKQKVVDQLQSGSSSKKKNRAETLPVKGLGVEVLEKME
TEKRNDAIWQGKCSGTVYIGGGESEGHFALINQACSMFAHTNPLHIDVFQSVVRFESEVV
AMTAALLGSKETVSGEQICGNMTSGGTESIVLAVKSSRDYMKYKKGITRPEMIIPESGHS
AYDKAAQYFNIKLWRVPVDKEFRADVKAIRRHINRNTIMIVGSAPGFPHGIIDPIEELGQ
LALSYGICFHVDLCLGGFVLPFARKLGYQIPAFDFSVQGVTSISVDVHKYGLAPKGTSTV
LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLQNTSKIM
EASKRLEEGVREIHELFVIGKPDMTIVAFGSKELDIFEVNDIMSSKGWHLNALQRPNSIH
ICITLQHVPVVDDFLQDLRGAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFM
DSQY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggattatttttcatattcttcgatgaaatcaatggtgattcaagctcgaggctcgtta
aactcgcgtttgtctgagtttgagcctctgtttctgctcttggctccccttctcactctt
tttttcgctcagatcatcggatctgtcttgggcgttgtgaacgacaaaggattgaaagcg
tgtcttgttgggttcatcatgggattcctcaaaatgatccctggagttcagaattacatt
gatgctgagaaacaaaaggttgttgatcaattacaatctggtagtagctctaagaaaaag
aatcgggctgaaacattgccagtaaaaggtctaggagttgaagttctcgagaaaatggag
actgaaaagaggaatgacgctatttggcaaggaaaatgctctggcactgtatacataggt
ggaggggagtctgaaggtcattttgcattgataaaccaagcatgttcaatgtttgcgcat
accaatccgttgcatatagacgtgttccagagtgtggtgcggtttgagtcagaagtagtg
gcaatgactgctgcgttactcgggagtaaagaaacggtttcaggagaacaaatatgtgga
aacatgacgtctggaggaacagaaagtatagtgttggctgtgaagtcatctcgtgactat
atgaagtacaagaagggtatcacccggccagaaatgattatacctgaatcgggtcattcg
gcttatgataaggcggctcagtacttcaacatcaaattgtggcgagttccagtagacaaa
gaatttcgagctgatgtgaaggcaataaggcggcatattaacagaaacaccatcatgatt
gttggatcagcaccaggattccctcatggcatcatcgatcctattgaggagcttggtcaa
ctggctcttagctatggaatatgctttcatgttgacctttgccttggtggttttgtgtta
cctttcgctcgcaaacttgggtatcagatcccagcttttgatttttctgtacaaggagtt
acttcaatttcggtggacgtgcataaatatggtttggctcctaaaggaactagtacagtt
ctctacagaaatcatgagatcagaaagcaccaatttgttgctgtaactgaatggtcagga
ggtctatacgtgtccccaactatagctgggagtaggcctggttctttggttgctggtgct
tgggctgcaatgatgtctctcggcgaagaaggctacctacaaaacacaagcaagataatg
gaagcatcaaagagactagaagaaggcgtaagagaaatccatgaactgttcgtcattgga
aagccagatatgacaattgtggcgtttggttctaaagaattagatatctttgaagtgaac
gacatcatgtcgtcaaaaggttggcatttgaatgcgctacagagacccaacagcattcat
atatgtataactcttcaacacgtccctgtagtcgatgacttcctccaggatctgcgtgga
gctgtagaaactgtgaaagcaaatccaggaccgatcactggaggcttggctccaatatat
ggagctgcagggaagatgccggaccgaggcatggtgaatgagcttctggttagtttcatg
gacagtcaatactaa
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