Camelina sativa (false flax): 104776855
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Entry
104776855 CDS
T05044
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104776855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104776855
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104776855
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
104776855
NCBI-ProteinID:
XP_010499299
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Position
3:12998589..13002275
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AA seq
777 aa
AA seq
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MDKERYSRSHRDDRDRDSSPDHSPQREGGRRRDRDVESKRRDSDHYRSSRREDREDERDR
GKERGRRSVERGEREGSRDRERYHHEMAHEGTKEKESRSKRKERDEENGARDGKKKSRFS
DGNGERKSRFEDVAMESENKSAHVTEGSGALNPTSGVSIGASSITSVASEASLAPSQTLL
TKVSSIYTTDENKASIVRSHEVPGKSSTDGRPLSTAGKSTPNMSSDALAKAKKTLQFKHK
GLADKLKKLPLLNKGTKSTSEGSPDTRVPSSTTTPAVSTGTSFASAVPHSGLAGLGSINI
EAVKRAQELAANMGFRLDGNLFSGQAPSDTAVAERPAKPPVLRVDALGREIDEHGNVISV
TKPSNLSTLKVNINKQKKDAFQILKPQLEEDLKEDPHFDPRMGIDVKKIVRPKRMTFQFV
EEGKWTRDAESLKLKSQFGEAKERELKVKQVHLAKAKDDINPNLIEVSERVPRKEKPKEP
IPDVEWWDANVLVNGEYGDIADGIITESDLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLK
LTKKEQKKLRTQRRLAKEKDKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKE
IRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETLVSVYKIKKLSHPKTRF
KVEMNARDNRLTGCSVMTEGMSVVVVEGKSKAINRYGKLMLRRINWEEAEKKEEKDDEEE
EANGENKCWLVWQGSVAKPSFHRFHVQECLTESSAKKIFIDAGVVHYWDLAVNYSDD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagagatattccaggagccaccgtgacgatcgtgatcgtgattcgagtccc
gaccattctccgcaacgtgaaggcggacgccgccgcgatcgcgatgttgagtcgaagcgg
cgtgattcagaccactaccgttcatcgaggcgcgaggatagggaggatgagagagatagg
ggtaaggagagaggtaggagatctgtagagcgaggcgagagggaaggcagtagagatagg
gaaaggtatcatcatgagatggctcacgaaggaactaaagagaaggaatcgaggagcaag
aggaaagagagagacgaggagaatggggctagggatgggaagaagaaatctaggttttcc
gatgggaatggtgagaggaagagcaggtttgaggatgtggctatggaatctgagaacaag
agtgctcacgtcactgagggttctggggctttgaatcctaccagcggcgtttcgattggc
gcctcttcaattacttctgttgcatcggaagcttctttggctcctagtcaaaccctgctc
actaaggtatcttcgatatatacaacggatgaaaataaggctagtattgtcagatctcat
gaggttcctggaaaatctagtacagatggaagaccattgtcaacagctgggaaaagtact
ccaaacatgtcttctgatgcgttagcgaaagctaagaaaacactacagttcaagcacaaa
ggattggcggataaattgaagaaactgcctttgttgaacaagggtactaagtcaacttca
gaaggtagcccagataccagagtaccatcatcgactaccactcctgctgtctctacagga
acatcttttgcatcagcagtgccacattctggccttgctggtcttgggagtattaacatt
gaagctgttaagcgagctcaggagctggcagctaacatgggatttcgtctggatggaaac
ctattttcaggacaagcaccctcagatacggctgttgcagagagacccgccaagccccct
gttctgcgtgtggatgcactaggaagggagattgatgaacatggaaatgttattagtgtg
actaaaccaagcaatcttagtacattgaaggttaacataaacaaacagaagaaagacgct
tttcagattcttaaacctcaactggaagaagatctaaaagaagacccccattttgaccca
cggatgggtattgatgtaaaaaagattgtgagacctaaacgtatgactttccagtttgtt
gaggaaggtaaatggacaagagatgctgagagtttgaagttaaagagtcaatttggtgaa
gcaaaagaaagggagctgaaggtgaagcaagtgcatctggcaaaggcaaaggatgatata
aatccaaatttgatagaggtatcagaacgtgtcccgagaaaagagaagccgaaggagcca
attccagatgttgagtggtgggatgcaaatgtcctcgtcaatggcgaatacggtgacata
gccgatggcattattactgaaagcgatctaaagatagaaaaacttactcattacattgag
catcctcgtcccatagagccacctgcagaggcagcgcctccaccaccccaacctctcaaa
ctgacaaagaaggaacagaagaaactgcgaacacagaggcgtctagcaaaagaaaaggat
aaacaggagatgatccgacaagggttgcttgaaccaccaaaagcaaaggtgaagatgagc
aacttgatgaaggttcttgggtctgaagcgacccaagacccaaccaagcttgaaaaagag
atccgcacagcagctgccgagcgtgagcaggctcatacggacaggaacgcagcccggaag
ctaactcctgcagagaaacgtgagaagaaagagaggaagctatttgatgatccaacaacg
gttgagacacttgtgtcggtgtacaagatcaagaagctatcgcatcctaaaacaagattt
aaagtggagatgaatgcaagagacaacagactaacagggtgtagtgtgatgacggaggga
atgagtgttgttgtggttgagggcaaaagcaaagcgataaatagatatgggaagctgatg
ctgaggcgaataaactgggaagaagcagagaagaaggaagagaaggatgacgaggaagaa
gaggcgaatggggaaaacaaatgttggttggtttggcaaggaagcgttgcaaagccgagt
tttcacaggtttcatgtacaagaatgcctgaccgaatcctctgccaagaaaattttcatt
gatgctggtgttgttcactactgggatctcgccgtcaattactcagacgactaa
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