Camelina sativa (false flax): 104777303
Help
Entry
104777303 CDS
T05044
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104777303
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csat01001
]
104777303
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104777303
03036 Chromosome and associated proteins [BR:
csat03036
]
104777303
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104777303
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104777303
Protein kinases [BR:
csat01001
]
Serine/threonine kinases: Other
TAF1 family
104777303
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104777303
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104777303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
104777303
NCBI-ProteinID:
XP_010499825
LinkDB
All DBs
Position
3:16407980..16414999
Genome browser
AA seq
1137 aa
AA seq
DB search
MLSNAGMGANLCTYYQKSSPEDQRGNLLGNQSDTLGNVMILEPGDKSPFLGEIHPGCSQS
SIETNMYKAPVFPQRLQSTDYLLVRSPKGKLSLRRIDKIVAVGQQEPRMEVMSPGSKNLQ
TYLVNRMLVYVYREFSKRGERHSIAADELSFLFSNLTDAIIKRNMKTCAALKRDKNGQQY
WSKKELPDPSENELKKLVAPEHVCSYESMLAGLYRLKHLGITRFTLPASISNALAQLPDE
AIALAAASHIERELQITPWNLSSNFVACTNQDRANIERLEITGVGDPSGRGLGFSYVRAA
PKAPAAAGHMKKKAAAGRGAPTVTGTDADLRRLSMEAAREVLLKFNVPDEIIFKQTRWHR
IAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKCQEIWDRQLLSLSAFD
GDENESENEANSDLDSFAGDLENLLDAEEGGDGEESNMSKNDKLDGVKGLKMRRRPSQVE
TDEEIEDEATEYAELCRLLMQDEDQKKKKKKMKGVGEGMGSFPPPRPNIGFQISEPLRKP
NAIEKKPIAIQPDASFFVNENTVKDIRNVDSPIIKTPKSKQVKENINSLGQLRKVKILNE
NLKVFKEKKSARENFVCGACGQHGHMRTNKHCPRYRENTDSQPEGLNMEKSAGKPSTSEL
SGQPKLKPIKNSKAATKSTKKTSDEVPKGDNLTVKTGGLPMKFRYGIPTGELSDKPVSEA
PGSSEQAVVSDIDTGTKSTSKISKLKISSKAKPKESKVESDRPPHPLMPTFSRERGESEP
HKPSVSGQPLSSTERNQVASSRHTISIPRPSLSMDTDQAESRRPHLVIRPPTEREQPQKK
LVIKRSKEINDHDMSSLEESPRFESRKTKRMAELAGFQKQQSFRLAENSLERRPKEDRVW
WEEEEISTGRHMEVTTRRDYDDMTVSEEPNEIAEIRRYEEVLRSEREEEERQKAKKKKKK
KKLQPELIEGYVEDYPPRRNDRRLPERGRNVRSRYVSDFERDGAEYAPQPKRRKKGEVGL
ANILERIVDTLRLKEEVSRLFLKPVSKKEAPDYLAVVERPMDLSTIRDKVRKIEYRNRDQ
FRHDVWQITYNAHLYNDRRNPGIPPLADQLLEICDYLLDDYEVQLSEAEKGIVDPND
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtaatgcaggaatgggtgcaaatttgtgcacatattatcagaagtcatcgcca
gaggatcaacgaggcaacttgctgggcaatcaaagtgacactttaggaaatgtgatgatt
ctagaacctggggacaagtctcctttccttggggagatacaccctggttgcagtcagtca
tcaattgaaacaaacatgtataaagcacctgttttcccgcagagattgcaatcaacagat
tacttgttggtccggtctcctaaaggaaagctctctctaaggcgtattgacaagatagtt
gctgttggacaacaggaacctcgcatggaagtaatgtctcctggatcaaagaatctacag
acttatttggtgaacagaatgttggtttatgtgtaccgagaattttcgaagcgtggtgag
cgtcactcaattgctgcagatgagctgtctttcttattttctaacttgaccgatgcaatc
atcaagaggaacatgaaaacttgtgctgctttgaagagggataaaaatggccagcaatat
tggtcaaaaaaagaattgccagatccatctgagaatgagctgaaaaagctggtggcacca
gagcatgtgtgttcctatgagagtatgctagctggcctgtaccggctcaaacatttaggg
atcacccggtttacattacctgccagcatatctaatgcattggctcaactcccagacgaa
gctattgctcttgctgctgcatcacatattgagagggagttgcagattactccatggaat
ctaagcagtaattttgttgcttgtacgaatcaggacagagcaaatatagagcgtttggaa
attactggggttggtgatccctctggacggggtctaggattcagctatgtcagagctgca
ccaaaagcaccagctgcagccgggcatatgaagaaaaaggcagcagccggtcgtggagcc
ccaactgtcactggtacagatgctgatcttcgcagattaagcatggaagcagctcgagag
gtacttcttaagtttaatgtccctgatgagatcattttcaagcaaactcgatggcaccgt
atagctatgatacggaaactatcaagtgagcaggctgcatccggtgttaaggttgaccct
acaaccataggcaagtatgctcgtggccagagaatgtcttttctgcagatgcaacagcag
gcccgagaaaagtgtcaggagatttgggataggcagcttttgtccctttcagcttttgat
ggtgatgagaatgaaagtgaaaacgaggcgaacagtgacttagactcctttgcgggagat
ctggaaaatctacttgatgctgaggaaggtggggacggggaagaatctaatatgtctaag
aatgacaagttggacggagttaagggtctcaagatgagacggcggccatctcaagttgag
acagatgaagaaattgaagatgaagctactgaatatgcagaattatgccgattgctgatg
caagatgaggatcagaagaagaaaaagaagaagatgaaaggtgtgggagagggaatggga
tcctttcctcctccacgacccaatataggttttcagattagtgaaccgttacgaaagccc
aatgccattgagaagaaacctattgccatccaacctgatgcatctttctttgtaaatgag
aacaccgtcaaagacatcagaaatgttgatagcccaattataaagacccccaaaagtaaa
caggtgaaagagaacatcaattctttgggccagctgaggaaggtcaaaatactgaacgaa
aacctaaaggtattcaaggaaaagaaatcagcgagagagaactttgtttgtggagcctgt
ggtcagcatgggcacatgagaaccaataaacactgcccaagatacagagaaaatacagat
tcacaacctgaaggcttaaatatggagaagtctgcgggaaagccaagtacttcagaacta
tcaggtcagcccaagctaaaacctattaagaacagcaaggctgcgacaaaaagtacaaag
aaaacttctgatgaagttccaaagggagataatttaactgtcaaaactgggggtcttcct
atgaagtttagatatggtatccccactggagagctgtcagataaacctgtttctgaagct
cccggaagttctgagcaagcagtggtgtctgacatagacaccgggactaagtctacatct
aagatcagcaaactgaagatttcaagtaaggcaaaacctaaagaatcaaaggttgaatct
gatagacctccgcatccattgatgcctacatttagtagagagagaggggagagcgaacca
cacaagccatctgtttctggacaacctttgtctagtacagagagaaatcaggtagcctca
agcaggcacactatttctattccgcggccatcattaagcatggacacggatcaagctgaa
tcacgtaggcctcatctcgtgatacgaccgccaacagaaagagaacagcctcagaagaaa
cttgttataaaacgttcgaaggagataaatgatcatgacatgagtagtcttgaggagagt
ccacggtttgaatcccgtaaaacaaaaagaatggcagaactggcaggttttcagaagcag
cagagcttcagattggcagagaactccctagagcggagaccaaaagaggatagagtatgg
tgggaggaagaggagataagtacgggaagacatatggaagtaacgacgagaagagattat
gatgatatgactgtatcagaagaacccaatgagatagctgagatcagaagatacgaagag
gtattaaggagtgagagggaggaagaggaacgacaaaaagccaagaagaaaaaaaagaaa
aagaagctgcaacccgaattaatagaagggtatgtagaagattatcctcctcggagaaac
gatagaagattgccagaaagagggcggaacgtcagaagccgctacgtctccgactttgaa
agagatggtgcagagtatgcacctcaaccaaaacgacgcaaaaaaggagaggttggccta
gcaaacatcttggaacgcatagtggacacactaagacttaaagaggaagtgtcacgcctc
ttcttaaaaccggtttccaagaaggaggctccggactatcttgctgttgtggaacgcccg
atggatctctcgacaatccgggataaggtacggaaaatagagtacagaaaccgagaccag
tttagacacgacgtctggcagatcacatacaatgcccacctttacaacgacagacgtaac
ccaggcataccgcctttggcagatcagttactggagatttgtgattacttgttggatgat
tatgaagttcagttatcagaagcagagaaaggtatagtagatcctaatgactga
DBGET
integrated database retrieval system
