Camelina sativa (false flax): 104777619
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Entry
104777619 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104777619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104777619
03041 Spliceosome [BR:
csat03041
]
104777619
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104777619
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104777619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Tsp45I
Motif
Other DBs
NCBI-GeneID:
104777619
NCBI-ProteinID:
XP_010500201
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All DBs
Position
3:20393361..20397177
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AA seq
448 aa
AA seq
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MANNMVATANKSPVELLQETKAYIEAIFERMLSIKQKGKPKSENRELLTQMFLNFINLRK
ANRAILVEEEKVKTETELAKSPVDFTIHNLMYEKSHYLKANKASRDFKSRYPNIDXISEL
EFFSEAPEAIKSQTLSNDTSHDLMLKRLNFELHQRKELCKLRERLEQHKKSLVESNEERN
KFLSSLPVHLKSLKKASLPVQSQLSLPDPKKLKYHNLAELLPLPLYVIYSXFMARKEAFE
ENIDLEVSGSLKDAQTYAREQAEQNSESLRLEDDGEDDDGKRQRKRPKKEGSDEGGLYES
HPLKVVLHVYDVEIPDPKSDRPVVLKFEYLLKLNVVCVGIEESQDELEKSILCNLFPEDA
GLEPPHQSAKLILGDDHLFDMSRTSRPYKWAHHLAGIEILPEMSPFFTDKDTQTSGTAID
YASASDHRNVQTVLERIRSQKKAKLTLV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaacatggtggctacggcgaataaatcaccggtagagctacttcaagagacc
aaagcctacatcgaggccatcttcgagaggatgctctcaatcaagcaaaaaggaaaaccc
aaatccgagaatcgagaactcctcactcagatgtttctcaacttcatcaatctgcgaaaa
gcgaatcgcgcgattcttgtagaggaagagaaagttaaaactgagactgagttagcaaaa
tctccggtggatttcacgattcacaatctcatgtatgagaagagtcattacctcaaagct
aataaagctagcagagatttcaaatctaggtatcccaacatcgacntcatatctgaacta
gagttcttcagtgaagctcctgaagcaatcaagtctcaaactctttcaaatgatacttct
catgatttgatgcttaaaagactcaattttgagcttcatcagaggaaagaactatgcaag
cttagagagaggttggaacaacataagaagagtttggtggaaagtaatgaagagcgtaac
aagtttctgtcaagtcttccagtgcatctcaaatctttaaagaaagcatctttgccagta
cagagccagttgagtttgccggatccgaagaagctgaagtatcataatttagctgagctt
cttcctctgccgctttatgttatatattcgtagttcatggcacgaaaggaagcttttgaa
gagaatatagatctcgaggtatctgggagccttaaggatgctcaaacttatgcccgggag
caggcagaacagaactcagagagtctaagattggaggatgatggtgaagatgatgatgga
aaaaggcaaaggaaacgacccaagaaagagggttctgatgagggaggactatatgagagt
catcctcttaaagttgtccttcacgtatatgatgttgagattccagatccgaaatccgat
agacctgtcgtgctaaagtttgagtacttgttgaagttgaacgttgtatgtgttggcatt
gaagagtctcaggatgaacttgagaaaagtatactatgtaacttatttccagaagatgct
ggtcttgagcctcctcatcagtcagcaaagctcattcttggcgatgatcatttatttgat
atgagcagaacttcgagaccatataagtgggcacaccatttggcggggattgagatttta
cctgagatgtcaccattttttactgacaaggatactcagactagtggtacagctatagac
tatgcttctgcgtctgatcaccgcaatgtgcaaaccgttctggaaagaatacggtcccag
aaaaaggctaagctaactcttgtctga
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