Camelina sativa (false flax): 104777718
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Entry
104777718 CDS
T05044
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104777718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104777718
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104777718
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
DUF5041
Motif
Other DBs
NCBI-GeneID:
104777718
NCBI-ProteinID:
XP_010500317
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All DBs
Position
3:22321316..22325095
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AA seq
681 aa
AA seq
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MARNREGLVLLIDVGPAMHSVLPDVEKACSLLLQKKLIYNKYDEVGIVVFGTEETGNELA
REIGGYEHVTVLRNIRVVDEVVAEHVKQLPRGTVAGDFLDAVIVEMDMLIKMYSAGQKGK
KRMCLITNAACPTKDPFEGTKDDQVSTIATKMAAEGIKMESIVMRSNLIGDAHEKVIEEN
DHLLNLFSSNAIAKTVNVESPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA
EERLSTLQLYSDKAPPTDKFAKHEVKIDYDYKVTAESTQVIAPEERVKGFRYGPQVIPIS
PDEIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKE
TNKVAIVRCVWRNGQDNVVVGVLTPNVSEREDTPDSFYFNVLPFAEDVREFPFPSFNKLP
SSWKPDEQQQAVADNLVKMLDLAPSAKEEVLLPDLTPNPVLQRFYEYLELKSKSTDAALP
PMDETFKRIMEQDPELSSNNKSIMDAFRGSFEVKENPKLKKASKRLLRDKPSGSDDEDNR
MITYDANKHKIDIVGDANPIQDFEAMISRRDNHDWAIKAITQMKKRIVKLVENCTDEGDK
ALECVLALRKGCVLEQEPKQFNEFLNHLFELCQERKLSHFLKHFTSKKITLIPKSEAPDS
DVVDENADDYFTVKQEPMLES
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaatcgggaagggttagttttgttgatcgatgttggtccagcgatgcatagt
gttctccctgatgttgaaaaggcatgttctttgctacttcaaaagaagttgatttacaac
aagtatgatgaagttggaattgttgtatttggaactgaagaaaccggaaacgagcttgct
agggaaataggtggatatgagcatgttacagttttaaggaatattagagttgttgatgaa
gtcgtggctgagcatgtaaagcagctccctcgaggaaccgtagctggcgactttcttgat
gctgtgattgttgagatggatatgcttataaagatgtatagtgctgggcaaaaggggaaa
aagcggatgtgtctcatcacgaatgctgcttgtcctaccaaagatccatttgaagggact
aaagatgatcaagtcagcactatcgctacgaaaatggctgcagagggtataaagatggaa
agcattgtcatgaggtccaatttaattggtgatgctcatgagaaagtgattgaggagaat
gatcatttgttgaatttgttctccagcaacgccattgcaaaaacagtgaatgttgagagt
ccactctcactgctaggttccttaaagacaagaagggttgctccagttactttgttcagg
ggtgaccttgaaattaacccaacaatgaagattaaggtgtgggtttataagaaagtggct
gaggagagactctccactctacaattgtattctgacaaagcgcctccaactgacaagttt
gcgaaacatgaagtgaaaattgattatgattacaaagttactgcagaatctactcaggtt
attgctccagaagaaagggtcaagggctttcgctatggacctcaagttattcctatatca
ccagatgagatagaaacactcaagtttaaaactgacaaaggcatgaagcttctgggattt
actgaggcatcaaacatactgcgacattattacatgaaagacgtgaatatagttgttcct
gacccgagcaaagaaaaatctgttcttgccgtctcagccattgcaagagaaatgaaggaa
acaaacaaggtagcaattgtacgttgtgtctggagaaatggacaagacaatgtggttgtt
ggcgtcctgactccaaatgtttctgaaagagaagacacccctgattcattttactttaat
gtgctacctttcgccgaggatgtccgcgagtttccatttccttctttcaacaaacttccc
tcatcatggaagccagatgaacaacagcaagcagtagcagataatttggttaagatgctt
gaccttgcaccttctgctaaagaggaagtactactgcctgatcttactcctaacccggtt
ttgcagcgtttttatgaataccttgagctgaaatcaaaatcaacggatgctgctttacct
ccaatggatgaaacattcaagagaattatggagcaggatcctgaactctcttccaacaat
aaatccataatggatgcctttcgtggaagttttgaagtcaaggagaatccgaagttgaag
aaggcttctaagagattgttacgggataaaccatcgggttcagatgatgaagacaatcgc
atgattacttatgatgccaataagcacaaaattgatatagtcggagatgcaaacccaatc
caagattttgaagccatgatatcccgcagagataaccatgattgggccattaaagcaata
acacaaatgaaaaaacgaatagtgaagctcgtcgaaaattgtactgatgagggtgacaaa
gcattggaatgcgtactcgctcttcgtaaaggctgcgtcttggagcaggaaccaaagcaa
ttcaacgagttcttgaaccatctattcgagttatgccaagaaagaaaactatcgcatttt
ctcaaacatttcacgtcaaagaagatcacattgattcccaaatccgaagcgccagacagt
gatgtggtagacgagaacgctgatgattatttcaccgttaaacaagagccaatgctggag
agctaa
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