KEGG   Camelina sativa (false flax): 104777961
Entry
104777961         CDS       T05044                                 
Name
(RefSeq) protein transport protein SEC13 homolog A-like
  KO
K14004  protein transport protein SEC13
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104777961
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104777961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104777961
   04131 Membrane trafficking [BR:csat04131]
    104777961
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104777961
Membrane trafficking [BR:csat04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    104777961
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104777961
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104777961
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EIPR1 WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_C DSE1_N Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR41 WD40_2 Beta-prop_SCAP Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 104777961
NCBI-ProteinID: XP_010500953
UniProt: A0ABM0YHH9
LinkDB
Position
1
AA seq 302 aa
MPPQKIETGHSDTVHDVVMDYYGKRVATASSDCTIKITGVNNSSGSQPLATLTGHRGPVW
QVAWAHPKFGSLLASCSYDGQIILWKEGDQNQWAQAHFFTDHKVSVNSIAWAPHDLGLSL
ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMLEPVYKLA
SGGCDSTVKVWKFSNGSWKMDCFPALSKHTDRVRDVAWAPNLGLPKSTIASGSEDGKVII
WTTGKEGEQWEGKVLKDFETTVWRVSWSLTGNLLAVSYGNNNVTVWKEVVDGEWEEVTAV
EP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcctccccagaagattgaaactggtcatagcgacactgtccatgatgtggtcatggat
tactatggaaagcgagtggctactgcctcatctgactgcactatcaagattaccggagta
aacaacagcagtggatcacagcctctagctaccttaaccggtcaccgaggtcctgtatgg
caagtcgcttgggcgcacccaaagttcggttcgctcctcgcttcatgttcctacgatggg
cagatcatactatggaaagaaggtgaccagaaccaatgggcacaagctcatttcttcact
gaccacaaagtatcagtcaactctatcgcttgggctcctcatgatctcggactctcctta
gcttgtggagcatccgatggaaacatatccgttttctcagctagagctgatggcggttgg
gacacgacaaagatcgaccaagcacacccggttggagtcacttcagtctcgtgggcacca
gccacagaaccaggggcactcgttagctcaggtatgctcgagccggtttacaaactagca
tcaggtgggtgtgacagcaccgtgaaagtgtggaaattctccaacgggtcatggaaaatg
gactgtttcccggctcttagcaagcacacagatagggtgcgtgacgtggcatgggcaccg
aacctgggtctcccaaaatcaaccatagcgagtggttcagaagatgggaaagtgatcata
tggaccacagggaaagaaggggagcaatgggaaggcaaggtattgaaagatttcgagaca
acagtgtggagggtgtcgtggtcgttgacgggtaacttgttggccgtttcgtatgggaac
aataatgtaacagtgtggaaagaggttgttgatggagagtgggaagaagtgactgccgtt
gagccataa

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