Camelina sativa (false flax): 104777980
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Entry
104777980 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104777980
Membrane trafficking [BR:
csat04131
]
Protein recycling
Others
EARP complex
104777980
Endosome - Golgi transport
Tethering complex
GARP complex
104777980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG4_N
Vps54_N
XhlA
NPV_P10
Rif1_N
MPH2
COG5_N
EXOC6_Sec15_N
DUF7201
RecG_N
Motif
Other DBs
NCBI-GeneID:
104777980
NCBI-ProteinID:
XP_010500621
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All DBs
Position
3:complement(24531151..24540050)
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AA seq
824 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIQGEIRRVDASILSAVRQQSNSGTKAKEDLA
DATRAVEELSHKIQEIKSKAEQSEAMVQEICRDIKKLDFAKKNITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLNNHFEAYRDVPKITELREKLNNIKQILKSHVFSD
FSSLGTGKETEDTNLLQQLSDSCLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPASWHVPYRLCIQFCKQTRKQVEYILVNMKEKPVV
AILLLALQRTVEFEKELEKKFGGGVPTKDIEDDIEEIGTWEDNSQNISKIRKKYEKKFAA
NQESEENEKTGNKDLSVTGAGFNFRGMISSCFEPHLTPYIELEEKTLMDDLEKIVQEETW
DIEDGSQNNVLSSSTQLFSNIKKSLKRCNTLSTNQTLFNLFKVFQRVLKAYATKLFGKLP
KGGTGIVAAATGMDGQIKVSERDEKVICYIVNSAEYCHKTSGELAENVSEIIDPHYADGV
DMSEVKDEFSAVITKALVTLVLGLETKFDTEMAAMTRVLWSTLESVGDQSLYVNGINTIL
SSSIPVLGKLLTPVYFQFFLDKLASSLGPRFYANIFRCKQLSETGAQQMLLDTQAVKTIL
LEIPSLARQTSTAASYSKFVSREMSRAEALLKVILSPIDSVADTYRALFPEGTPMEFQRI
LELKGLKKADQQSILDDFNKHGLGFTQPSVAAAMPQPMPSPPAPPLAITNPATAAGFIAN
SEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGPLRRLFNA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcgagtgctttagagtatatcaaccagatgttcccaacagaggcatcccta
tctggcgttgagccacttatgcaaaagattcagggtgagattcgtcgggttgatgctagc
atactctctgctgttcgtcaacagagtaactcgggaactaaagctaaagaggatcttgct
gatgctacacgtgctgtggaggaactctctcataagatacaagagataaaatccaaagct
gagcaaagtgaagcaatggttcaagaaatatgccgtgacattaagaagttagattttgca
aagaagaacataaccaccacaatcactgctcttcatcgcctcacaatgttagtctctgct
gtggaacagcttcaggtgatggcgtcaaaaagacaatacaaagaggcagctgcacagctg
gaggccgtaaaccagttaaataatcacttcgaagcatacagggatgttcctaaaatcacg
gagctcagagaaaagcttaataatataaagcaaatcctgaagtcccatgtattttctgat
ttttccagtttaggcactgggaaagagacagaggacacaaatttgctacagcagctatct
gattcttgcttggttgttgatgctctggagccatctgtgagggaagagttggtaaacaac
ttttgcagcagggagctcacctcatatgaacaaatttttgaaggagctgaattggcaaag
ttggataaaacagagcggagatatgcttggattaagcgtcgaatccgaacaaatgaagaa
atttggaagatttttcctgcttcttggcatgtgccttatagattatgcatccagttctgc
aaacaaacaaggaagcaagtagaatatattctggtcaatatgaaagagaagccggttgta
gcgatattgcttctggcactacaaaggacagtcgagttcgaaaaagaacttgaaaagaaa
tttggtggtggtgttcctactaaagatattgaagatgacattgaagaaattggtacatgg
gaagataatagtcagaatatatccaaaatccgcaagaaatatgaaaagaagtttgctgct
aatcaagaatccgaggagaatgaaaagaccggaaacaaagacttatctgttactggcgct
gggtttaacttccgtggaatgatctcttcctgctttgaacctcatttaactccatatatt
gagttggaagagaagacacttatggatgacctggagaaaatcgttcaggaggaaacatgg
gatattgaggatggaagtcaaaataatgttttatctagcagcacacagctattttccaat
ataaagaagagcttgaaacgttgtaatactctcagtacgaaccagactttattcaatttg
ttcaaggtctttcaacgagttctgaaggcctatgctacaaagctatttggtaagctccca
aaaggaggcactggtatcgttgccgcagccacaggcatggatggacagataaaggtctcg
gagagagatgaaaaggtgatatgctacatagttaattctgctgagtattgccacaaaaca
tctggtgaactggcagaaaacgtctcagaaattattgacccacattatgctgatggtgta
gacatgtcagaggtcaaggatgaattttcagctgtcataacgaaagcattggtaacactg
gtccttggacttgagactaaatttgacacagaaatggcagcgatgacacgtgttctatgg
agcacactcgagagcgtgggtgaccagtctttgtacgtgaatggaataaatacaatcctt
agcagcagcattcctgtcctcgggaaacttctaacaccagtttacttccagtttttcctc
gacaagctggcatcatccctaggaccacggttctatgctaatattttcagatgcaagcaa
ctatccgaaactggagctcaacagatgttactagatacgcaagccgtgaagacgattctg
ctagagattccttcccttgccagacagacttcaactgcagccagctattccaaatttgtg
agccgtgaaatgagcagagctgaagcactccttaaggtcatactatccccaatagattca
gtggcagacacttatcgtgcactgtttccggaaggaacacccatggagtttcaacgcatc
ttggaacttaagggtctgaaaaaagctgatcagcagagtatacttgatgatttcaacaag
catggcctaggattcacacagccgtcagttgcagcggcaatgccacaacctatgccaagc
ccacctgcacccccactggcaatcactaatccggctacagccgctgggttcatagcaaac
agtgaggatgtgttaactagagcagctgcgcttggcagaggagctgcaagcactggcttc
aagaagttcatcgctcttactgaagctgccaaagaccgcaaagatggacctctgaggaga
ctcttcaacgcatga
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