Camelina sativa (false flax): 104778060
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Entry
104778060 CDS
T05044
Name
(RefSeq) RNA-binding protein 8A-B-like
KO
K12876
RNA-binding protein 8A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104778060
09122 Translation
03013 Nucleocytoplasmic transport
104778060
03015 mRNA surveillance pathway
104778060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104778060
03041 Spliceosome [BR:
csat03041
]
104778060
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104778060
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104778060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104778060
NCBI-ProteinID:
XP_010500725
UniProt:
A0ABM0YGZ0
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All DBs
Position
3:complement(25381667..25383739)
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AA seq
204 aa
AA seq
DB search
MANIESEAIDFEPEEDDLMDEEVTAVDAADVSPRAGHPRLKSAIAGANGESAAQKKTKGR
GFRDERDSDRQRRLSSRDFESLGSDGGHGPQRSIEGWIILVAGVHEEAQDDDLFNAFGDF
GEIKNLHLNLDRRTGFVKGYALIEYEKKEDAQKAISAMNGAELLTQNVTVDWAFSSGPSS
GGSHWRKNQRSGRSQRSRSPRRRY
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatagaatcagaagcaatcgatttcgagcctgaggaggatgaccttatggat
gaagaagttacagcagttgacgccgccgatgtttctccacgcgcgggacacccgaggctt
aagtcggctatcgccggagctaacggagaatcagcggcgcagaagaagactaaaggccgt
gggtttcgcgacgagagagattccgatcgtcagcgccgtctttcctcacgcgatttcgag
tcactcggttctgacggcggtcatggtccacagcgatccattgaaggatggattattttg
gttgctggagttcatgaggaagcacaggacgatgatttattcaatgcttttggtgacttt
ggggagataaagaatctacatctcaatctcgatcgtcgtactggttttgtcaagggctat
gctttgatagaatatgagaagaaagaagatgcacagaaggcgatatcagcaatgaatggt
gctgagcttctaacgcagaatgtcactgttgactgggcattcagcagtggtcccagttct
ggtggatctcactggagaaaaaaccagaggtctgggaggtcccagcgttcacgaagcccg
agaagacgttactga
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