Camelina sativa (false flax): 104778159
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Entry
104778159 CDS
T05044
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104778159
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104778159
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104778159
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104778159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
WD40_like
WD_LRWD1
Beta-prop_SPT8
TPR_GEMI5
Clathrin
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
104778159
NCBI-ProteinID:
XP_010500837
LinkDB
All DBs
Position
3:26121051..26128463
Genome browser
AA seq
921 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPV
RSAKFIARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGERLPLSVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKLFSKNFQ
EKRSIRPTFSAEKIFGGTLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWADSGDMVAI
ASDTSFYILKYNRDLVSSHFDSGRSTEEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS
SWKLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVFLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKANEILPTIPKDQHNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQE
IAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
VNSKAAESLADPEEYPNLFEDWQVALSVEGRAVETRGVYTGAENYPSHADKSSMTLVEAF
RNLQVEEEESLENGDIEHEEVVAEENGNELRNEEDVEEHHEEKEAEEEGIVDGDSTDGAV
LVNGSEADEEWGTNNEGNPSA
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgagatcaagagaaaattagctcaaaggtccgagagagtaaaatct
gtggatctgcatcctacagaaccatggattcttgcaagtttgtattctggaaccttgtgt
atttggaactaccagacacaggtgatggcgaaatcctttgaggtgaccgaattaccagtt
cggtcggccaagtttatagcgcgaaagcaatgggttgtggcaggagctgatgatatgtat
atccgtgtatacaactacaataccatggacaaggttaaagtgtttgaggctcattcagac
tacattaggtgtgtggctgttcatccgacccttccatatgtgctgtcatcttctgatgat
atgctcataaagctttgggactgggaaaagggttgggcttgcactcagatattcgaggga
cactcgcactatgtgatgcaagtcacatttaatccaaaagacaccaacacttttgccagt
gcatcacttgatcgtaccataaagatttggaatcttggttccccagacccaaattttaca
ttggatgcccatcagaaaggagtcaattgtgtagattatttcaccggtggtgataagccc
tatttaattaccggctctgatgatcacactgctaaggtctgggactatcaaacaaaaagt
tgtgtccagaccctggaagggcacacacacaatgtatctgcagtatgtttccatccagaa
cttccaattataatcactggttctgaagatggcaccgttcgcatttggcatgcaactaca
tacaggctagagaacactttgaattacggcctcgagagagtttgggcaattggttatatt
aaaagttcacgccgggttgtaattggatatgatgaaggaactatcatggttaaacttgga
cgagaaattcctgttgctagcatggacaataccggaaaaatcatatgggctaagcataat
gaaattcaaactgcaaacatcaaaagtattggtgcagattacgaggtaactgatggagag
aggttgccattgagtgttaaagagttggggacctgtgatctttatccacaaagcttgaag
cacaaccctaatgggaggttcgtcgtggtctgtggtgacggggagtatattatctacacg
gctttggcttggagaaataggtcatttggttctggactggaattcgtttggtcgtccgag
ggggagtgtgcagttagagaaagctcatcaaagattaaattatttagcaaaaatttccag
gaaaagaggagtatccgccctactttttcagctgagaagatctttggaggaaccttgtta
gctatgtgttcaagtgatttcatctgcttttatgattgggctgaatgtaggctgattcaa
cgtattgacgtcactgtaaagaatctatattgggctgacagtggtgatatggtagccatt
gctagtgacacatcattctacatcttgaaatacaaccgcgacctagtttcctcacatttt
gatagcggaagatctactgaggaagaaggtgttgaggatgcttttgaggttctccatgaa
aatgatgagcgtgttaggacaggtatatgggttggtgactgtttcatttacaacaactct
tcctggaagcttaactactgtgttggaggcgaggtaaccacaatgtatcatttggaccgc
ccaatgtatttgttgggatatcttgcgaatcaaagtcgggtgttcttggtagacaaagaa
ttcaatgttataggatacaccttgctactaagcctgattgagtacaagactcttgtgatg
cggggtgatttagacaaagccaatgaaatcttaccgacaattcctaaagatcagcataac
agtgttgctcatttcttggagtcacggggaatgattgaagatgctctggaaattgcaaca
gatcctgactacagatttgagttggccatacaactgggtagacttgaaattgcacaggaa
atcgccgtagaagtacagagtgaatctaagtggaagcaattaggagaattagccatgtcc
tctggaaagctacaaatggcagaggaatgcatgaagtatgcgatggatttgagtggtttg
ttactgctttattcttctctgggagatgctgaaggtgtgacaaaacttgcaacacttgct
aaagaacaagggaagaacaatgtcgcctttctttgtctattcatgctgggtaaactggaa
gattgtttgcagttattggtggagagtaaccggataccagaagctgctctgatggcacga
tcatatcttccaagcaaagtttctgagatagtagctctttggaggaaagatctcagcaag
gttaattcgaaagcagcagaatctttggctgatcctgaggagtacccaaatctctttgaa
gattggcaagttgctctttctgtcgaaggtagagctgtagagacaaggggagtttacaca
ggtgcagaaaattatcctagccatgctgataaatcttccatgacccttgtggaagccttc
agaaacttgcaagttgaggaagaggaatcacttgaaaatggagacatcgaacacgaggag
gtagtagcagaagaaaatggaaatgaactaaggaatgaggaggatgtagaggagcatcat
gaagaaaaagaagcagaagaagaaggaattgttgacggagactctacggatggagctgta
cttgttaacggaagtgaggctgacgaagagtggggtacgaataatgaaggaaacccatca
gcctaa
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