Camelina sativa (false flax): 104778417
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Entry
104778417 CDS
T05044
Name
(RefSeq) TATA-box-binding protein 2-like isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104778417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104778417
03021 Transcription machinery [BR:
csat03021
]
104778417
Transcription factors [BR:
csat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
104778417
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104778417
RNA polymerase III system
TFIIIB
104778417
RNA polymerase I system
SL1/TIF-1B
104778417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
104778417
NCBI-ProteinID:
XP_010501160
UniProt:
A0ABM0YI06
LinkDB
All DBs
Position
3
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AA seq
202 aa
AA seq
DB search
MRMADQGMEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFA
AVIMRIREPKTTTLIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNI
VGSCDVKFPIRLEGLSFSHNAFSSYEPEIFPGLIYRMKKPKIVLLIFVSGKIVITGAKMR
EETYTAFENIYPVLTEFRKVQQ
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggctgatcaaggaatggaagggagccaaccagttgaccttactaagcatcct
tctgggattgttccaactcttcaaaatattgtctcaacagtgaacttagactgcaagctt
gatcttaaagccattgccttgcaggcgaggaatgctgaatacaatcccaagcgttttgct
gctgtaattatgaggattagagagccaaagactacaacgttgatctttgcatctgggaaa
atggtgtgtaccggagctaaaagtgaacatctttcaaagctggctgcaagaaagtatgct
cggattgttcagaagcttggctttcctgcaaagttcaaggatttcaagatacagaacatt
gtaggttcatgtgatgtcaaattcccgattaggcttgaaggtctttcattctctcataat
gctttctcaagttatgagcctgagatttttccaggattgatatataggatgaaaaaacca
aagattgttttgcttatttttgtgtcaggaaagattgttataactggagccaagatgaga
gaagagacttacactgcatttgagaatatctacccagttctgacagagttccggaaagtc
caacaataa
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