Camelina sativa (false flax): 104778722
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Entry
104778722 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104778722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104778722
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104778722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
104778722
NCBI-ProteinID:
XP_010501467
UniProt:
A0ABM0YIM7
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All DBs
Position
3:complement(6776034..6785672)
Genome browser
AA seq
1401 aa
AA seq
DB search
MSQDEEIAMRDVTSAGLCIGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV
GETWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGE
EQAICAVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPFAEISVQPLPD
YTISSDGVTMTCVTCTNKGRIFIAGRDGHIYELLYTTGSGWNKRCRKVCLTAGVGSVISR
WVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAYVFGPNGEGPLKKVAEEKNLLN
QKDVSQGNRQAAVAGRSNKPSIVSISPLSMLESKWLHLVAALSDGRRMYLSTSSSGSGSS
ISFSGFNNHRQTPNCLKVVSTRPSPPLGVGVGLGFGAASIAGRTQNEDLSMKVETAYYSV
GTLVLSPDTAATVQSLYSELEYCGLEVSGESYEKACGKLWARGDLSTQHILPRRKIVVFT
TMGMMELVFNRPVDILRRLLESNSPRSLLEDFFTRFGAGEAAAMCLMLAARIINFEDLMS
NIVADKAAEAFEDPRIVGMPQFDGTSGLSNTRTATGGFSMGQVVQEAEPIFSGAYEGLCL
CTSRLLFPLWELSVMSKKISSDTMSEEGVVICRLSTSAMHVLESKVRSLEKFLRSRRNQR
RGLYGCVAGLGDVTGSILYGTGSELGATERNMVRSLFGAYSNGGESANKRQRLPYSSAEL
AAREVRAMECIRQLLLRSAEALFLLQLLSQHHVARLVQGFDAYLKQALVQLTFHQLVCSE
EGDQIATRLISAVMEYYTGSDGRGTVDDISGRLREGCPSYFKESDYKFFLAVERLERAAL
TSDTEEKENVAREAFSFLSKIPGSADLRTVCKRFEELRFYEAVVCLPLQKAQALDPAGDA
FNDQLDASIREHALAQRKQCYEIIANSVRSLASSMLDEASRRQYICQIVHLGVQSTDRAF
REYLYKAMIELGLENELLEYGGPDLVPFLQNAGSHSASQVGAVSTGSSPLGHSGTQISSN
QAKYFDLLAKYYVSKRQHVLAAHVFLRLAERRAISSGDNPTLEQRRQYLSHAVLQAKNAS
NSDGLVGSSQGASDNELLDLLEGKLAVLQFQIKIRDELEAIASNSESSAAMQDSDQNGTV
LDGDSSDDSSLANAANEKAMELSSELKSVTQLYNEYAVPFELWEICLEMLYFANYSGDSD
SSIIRETWARLIDKALSQGGIAEACSVLKRVGSHIYPGGGVVLPLDVLCLHLEKAALERS
ERVGDVADDDIARALLAACKGAAEPVLNAYDRLLSNAAIVPSPNLRIRLLSSVLVVLLEW
AMSVLSDRMGSSPTSSSLILGGSFALENKAVSNQGVRDKIANAANRYMTEVRRLALPPNR
TELVYAGFKELDESLLTPFSF
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagacgaagagattgcgatgcgtgatgtgacaagcgcgggtctttgcattggt
gaccgcattggccgagaagccgcatcgcagcttgacctagaagaagctcttgaagcttct
agatacgctagtcacccttattcaactcatcccagagagtggccgcctttgattgaggtt
ggtgagacttgggaattgccttctgtacttattgagaggtataatacagctgggggagaa
gggacggctctgtgtgggattttcccggagatccgacgagcttgggcatctgtagacaat
tctttgtttctgtggcgttttgataaaagggatgggcaatgtcctgagtatagcggggag
gagcaagctatttgtgcggttggtctagcaaaatgtagacctggagtttttgttgaagct
attcaatatcttttggtgctggcaactcctgttgagttggttcttgttggagtgtgctgc
actgaaggacctgatggtagagatccttttgctgaaatttcagtacagcctctacctgac
tatacaatttcatcagatggagtgacaatgacatgcgttacatgtaccaataaagggcgc
attttcattgctggacgtgatggtcacatctatgaactgctatatacaactggctcaggc
tggaataaacgttgtcgtaaagtttgccttactgcaggcgtaggtagtgtgatctcaagg
tgggttgtgccaaatgtgttcaagtttggagctgtagatcctgtcgtagagatggttgtg
gataacgaaaggcaaattttatatgcccgcactgaagagatgaaacttcaagcatatgtt
tttgggccaaatggggaaggtcctcttaagaaggtggcagaagaaaagaatctactaaat
cagaaggatgtgagccaaggaaatcgtcaggcagcagtggcaggtcgatctaacaagccc
tccatagtcagcatttcgccattgtccatgctggagtcaaaatggttgcaccttgttgca
gcattatcagatggcaggaggatgtatctttccacctcctcaagtggaagtggtagcagt
attagctttagtgggtttaacaaccaccgtcagactccaaactgtctgaaagtggtttca
accaggccatctcctccattgggagtcggtgttggtcttggttttggagctgcatctatc
gctggtagaactcagaacgaagacctctctatgaaagttgaaactgcctactattctgtt
ggaactcttgtcctttctcctgatactgctgctactgttcaatctttatattcagaacta
gaatactgtggactcgaagtctcaggagagtcttatgaaaaagcatgtggaaaactctgg
gccagaggtgatctttcgacccagcatatattgccaaggagaaagattgtcgtttttacc
accatgggtatgatggaactcgtttttaataggcctgtggatatcttaaggagacttcta
gaatccaattctccaaggtcccttctagaagattttttcacccgctttggagcaggcgaa
gcagctgccatgtgcttgatgttggctgcccgaataataaattttgaagatttaatgagt
aatattgttgccgataaggcagctgaggcgtttgaggatccgagaattgtaggaatgcca
caatttgatggcactagtggattgtcaaacactagaacagcaactggaggtttcagcatg
ggccaagttgttcaagaagcggagcccattttctcaggtgcttatgaagggctctgcctt
tgtacatcaagattactgtttcccctatgggaactttctgtgatgtctaagaaaatcagt
tctgacaccatgtctgaggaaggagttgtgatctgtcgtctttctaccagtgctatgcat
gttctggaaagcaaggttcgatcattggagaaattcttaagatctagaagaaaccagaga
agggggctttatggatgtgttgctgggttaggagatgtaactggctctattttgtatggt
actggttcagagttgggagctactgagaggaatatggttaggagcttgtttggagcatat
tccaacggaggtgagtcagcaaataaaagacagcggttgccgtatagttctgctgaattg
gctgccagagaggtgagggctatggagtgtatcaggcagttgcttctcagatctgcagaa
gcccttttcctactccaacttctttctcaacatcatgttgctagattagttcaggggttt
gacgcatatctaaagcaagctttagttcagttgacattccatcagctagtttgttctgaa
gagggtgaccaaattgcaacaaggctcatatctgccgtgatggagtattatactggctca
gatggcaggggaacagttgacgatataagcgggcgactacgtgaaggttgcccaagttac
ttcaaggagtctgattacaaattcttcttagctgttgaacgtcttgagagagctgctcta
acttcagatactgaagagaaggagaatgttgctagagaggcgttcagtttcttgagcaaa
atccctggatctgcagatctccgaactgtttgcaaacgttttgaggaattgaggttctat
gaagctgttgtctgcttgcctttgcagaaggcccaagctcttgatcctgctggcgatgct
ttcaatgaccaacttgatgcttccataagagagcatgctcttgcccagcggaaacaatgc
tatgagattattgccaactccgtgcgatctttagctagttccatgctagacgaggcttca
cgtagacaatatatatgccagattgttcatcttggtgtgcaatcaactgacagagcgttc
cgggagtacctatacaaggccatgatagaactgggtcttgaaaacgagctcctggagtat
ggaggtccggatttggtaccttttctccagaatgctggcagtcattctgcatcacaggtt
ggggctgtatctactggttcatctccgctgggtcactcaggaacacagatttcatcaaat
caagcaaaatactttgatcttcttgcgaaatactatgtgtcaaagagacagcatgtgctt
gctgctcacgtatttctaaggcttgcagagagacgtgctattagttcaggggacaatcct
acacttgaacaaaggcgacaatacctaagccacgcagttttacaggccaagaatgcaagt
aatagtgatggtttagtaggttcttctcaaggtgcttctgacaatgagttgcttgatctg
cttgaaggaaaactcgcagttcttcagttccaaattaagatcagagacgaacttgaagct
atagcttccaattccgagtcctcggctgccatgcaggactctgaccagaacgggacagta
cttgatggtgattctagtgatgattccagcttagcaaatgcagcaaatgaaaaggccatg
gagctctcctcggaacttaaaagcgtaacacagttgtataatgaatatgctgtcccattt
gagctctgggagatctgtctggaaatgctctactttgccaactattctggtgattctgat
tcaagcataataagggaaacatgggctagacttattgacaaagctctttcacaaggtggg
atagctgaagcctgttcagttctcaagagagtcggatctcatatataccctggcggtgga
gttgttttacccctcgatgttttgtgccttcacctcgagaaagctgcacttgagagatca
gagagggttggggatgttgcggatgatgacatagctcgagctcttctggccgcttgcaaa
ggcgcagctgaacctgtgcttaacgcttatgaccgtttgctatccaatgcagccattgtg
ccatcaccaaatctaaggatccgcctccttagttcggttctagtggtgctccttgaatgg
gcaatgtctgtattgtcagacagaatggggtcgagtccaaccagctcttctctcatacta
ggcggatcatttgctctggagaacaaagctgttagtaatcaaggggtccgtgataagatc
gcaaacgctgcaaacaggtatatgacggaggtaaggagactggctctgccaccgaacagg
acggagttagtatacgcaggtttcaaagaacttgacgagtctctcttaactccattctcc
ttctga
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